Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10040522 |
Family | CBM43 |
Protein Properties | Length: 229 Molecular Weight: 22949.6 Isoelectric Point: 5.6379 |
Chromosome | Chromosome/Scaffold: 156 Start: 34487 End: 36646 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 23 | 103 | 5.2e-30 |
WCVCKDMPDAVLQKTLDYACGAGADCNPTHPNGPCFQPNTVRAHCSYAVNSYFQKKGQSQGSCDFSATATISTSDPSVNGC |
Full Sequence |
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Protein Sequence Length: 229 Download |
MATVMLLFGM LMLAMTGPAR CTWCVCKDMP DAVLQKTLDY ACGAGADCNP THPNGPCFQP 60 NTVRAHCSYA VNSYFQKKGQ SQGSCDFSAT ATISTSDPSV NGCSFPASAS ASNTVSNPTT 120 GGTSKNPGVG TGTTTTVPNI NNPYNANGGG LGGGVGNTAS SGTGLGASGP DGITDMSDTA 180 ATAIPTLSSS LITLVLAAIA TFTTFSQAFS SVAQFNVEEG GRAREKLN* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07983 | X8 | 2.0e-19 | 22 | 92 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. |
smart00768 | X8 | 2.0e-35 | 22 | 105 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92735.1 | 0 | 5 | 112 | 3 | 110 | unknown [Populus trichocarpa] |
GenBank | ABK93473.1 | 0 | 16 | 112 | 14 | 110 | unknown [Populus trichocarpa] |
RefSeq | XP_002317963.1 | 0 | 16 | 108 | 14 | 106 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328640.1 | 0 | 5 | 108 | 3 | 106 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514663.1 | 0 | 5 | 108 | 3 | 106 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-22 | 22 | 107 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |