Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10040541 |
Family | CE8 |
Protein Properties | Length: 347 Molecular Weight: 39202.3 Isoelectric Point: 6.8646 |
Chromosome | Chromosome/Scaffold: 156 Start: 198794 End: 201504 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 335 | 0 |
IKVDIDGEGDYKTIQEAIDAVPLYNSQWIIIHVRKGIYREKVHIPCNKPYIFLRGNGKGKTYIVWSQSSTDNMESATFKLESPNFIAYGISFKNEASVGE AFTSQNQSVAAFVGHDRAAFYRCAFYSNHNTLFDYKGRHYYDHCYIQGSIDFIFGRARSIFYSCEMFVIADFRVKILGSVTAQNREEADESGFVFVKGKV YGIGSVYLGRAKGAYSRVVFCKTYLSRTIAPEGWSNWSYDGTTENMFQAEYKCHGPGAESDKRVPWAKELTEKEAEEYMSIDFVD |
Full Sequence |
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Protein Sequence Length: 347 Download |
MASSINFQMV LAVTLVYGVV LFLSEQAEAM STNAKIDSQL LTSKIGTNRT IKVDIDGEGD 60 YKTIQEAIDA VPLYNSQWII IHVRKGIYRE KVHIPCNKPY IFLRGNGKGK TYIVWSQSST 120 DNMESATFKL ESPNFIAYGI SFKNEASVGE AFTSQNQSVA AFVGHDRAAF YRCAFYSNHN 180 TLFDYKGRHY YDHCYIQGSI DFIFGRARSI FYSCEMFVIA DFRVKILGSV TAQNREEADE 240 SGFVFVKGKV YGIGSVYLGR AKGAYSRVVF CKTYLSRTIA PEGWSNWSYD GTTENMFQAE 300 YKCHGPGAES DKRVPWAKEL TEKEAEEYMS IDFVDGKQWL PVWTEN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-83 | 49 | 340 | 298 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 1.0e-89 | 49 | 340 | 296 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-93 | 51 | 340 | 291 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-101 | 49 | 341 | 305 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 8 | 343 | 336 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 1 | 343 | 1 | 345 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 8 | 345 | 6 | 341 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 1 | 343 | 1 | 347 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 4 | 343 | 2 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 23 | 343 | 29 | 349 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 42 | 344 | 2 | 312 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-38 | 56 | 340 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000001 | 61 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000001 | 61 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000001 | 61 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |