y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10040557 |
Family | GH35 |
Protein Properties | Length: 718 Molecular Weight: 80141.1 Isoelectric Point: 9.2332 |
Chromosome | Chromosome/Scaffold: 156 Start: 339248 End: 342816 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 335 | 0 |
IVNGQRRILLSGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKLIQQAGLYVNLRIGPYVCAEWNFGGFPVWLKY QKGMSFRTDNGPFKAAMQKFTTKIVNMMKQEKLFEPQGGPIILSQIENEYGPVEYEIGAPGKAYTQWAAKMAVGLNTGVPWIMCKQDDVPDPLIDTCNAF YCENFKPKKSYRPKMWTEVWTGWYTGWGSPVPYRPAEDLAFAVARFIQNGGSFVNYYMYHGGTNFGRTAGGPFVATSYDYDAPLDEYGLTNDPKYTHLKN MHK |
Full Sequence |
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Protein Sequence Length: 718 Download |
MLLRQLSLTL LLLLLCVSTV VKASVTYDRK AIIVNGQRRI LLSGSIHYPR STPEMWPGLI 60 QKAKDGGLDV IQTYVFWNGH EPSPGNYYFE DRYDLVKFIK LIQQAGLYVN LRIGPYVCAE 120 WNFGGFPVWL KYQKGMSFRT DNGPFKAAMQ KFTTKIVNMM KQEKLFEPQG GPIILSQIEN 180 EYGPVEYEIG APGKAYTQWA AKMAVGLNTG VPWIMCKQDD VPDPLIDTCN AFYCENFKPK 240 KSYRPKMWTE VWTGWYTGWG SPVPYRPAED LAFAVARFIQ NGGSFVNYYM YHGGTNFGRT 300 AGGPFVATSY DYDAPLDEYG LTNDPKYTHL KNMHKAIKQC ESALVSADAT VRSLGKSQEV 360 KSINPSFNFC FLYGFWPFQR LGKLGRDKGF KIGNQIFKCL QLLIAMQVSA PRVHKKMTPV 420 GGFVWNSYID EITSGFASDT TTLDGMFEQL YLTQDSSDYL WYMTDVKIGS DEAFLKNGVD 480 PVLTVLSAGH FVNVFVNGKL IGSAYGGVDN PKLTFSKSVK LNVGVNKIAL LSASVGLANV 540 GVHYENYNVG VLGPVTLKGL NQGTVDMTKW KWSYKVGVEG EKLQLNTITG SSSVDWVDGS 600 TLVKKQPLSW YKATFNAPRG NEPLALDMIS MGKGQVWING QSIGRYWPAY KAQGNCGNCY 660 YGGYFTEKKC LTNCGQPTQR WYHVPRSWLK PTGNLLVVFE EWGGDPTGIS MVKRTAG* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.003 | 47 | 183 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 7.0e-19 | 25 | 333 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-159 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 21 | 717 | 705 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY71826.1 | 0 | 17 | 714 | 20 | 724 | beta-galactosidase [Prunus salicina] |
DDBJ | BAB21492.1 | 0 | 5 | 714 | 6 | 722 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72073.1 | 0 | 5 | 714 | 6 | 722 | pear beta-galactosidase1 [Pyrus communis] |
EMBL | CAH18936.1 | 0 | 9 | 714 | 3 | 715 | beta-galactosidase [Pyrus communis] |
RefSeq | XP_002514108.1 | 0 | 21 | 717 | 26 | 729 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 29 | 333 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7.00649e-43 | 24 | 356 | 10 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7.00649e-43 | 24 | 356 | 10 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |