Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10040808 |
Family | CBM43 |
Protein Properties | Length: 508 Molecular Weight: 55775.4 Isoelectric Point: 5.7582 |
Chromosome | Chromosome/Scaffold: 156 Start: 1556762 End: 1558736 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 378 | 460 | 1e-31 |
WCVPTSDASDEALQKNLDYVCSLGVDCQPIQDGGVCFSPNTVRSHASYAMNAYYQTYGHHYFNCDFDRTGVVTSTDPSYEACS | |||
GH17 | 26 | 340 | 0 |
IGVNYGTWGDNLPPPSQVAEFLKTHTTIDRIKMFDANPDIIRAFADTGISVTVTVANADVPALSKLPAAQDWIAANILPFHPQTTIRYILVGNEVLYWKD RNVIAYTLPAMKTVHHALQLANLTDIKVTTPHALSFLAASEPPSTGVFKKFDGEILEPILDFHRRTKTPFMVNPYPFFGYRDEVKDYAVFRPSKGLYDKH TGINYTNMFDEQMDAVYSSMKKLGKGYEEDVEIVIGETGWPSAGDPNQPGISLENALSYNGNVVKHVNSGKGTPLMPNRTFETYMFALFNENLKASISEK NYGLFKPDFTAVYDV |
Full Sequence |
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Protein Sequence Length: 508 Download |
MAQTSLIFLL LLSYIFISPS TASYSIGVNY GTWGDNLPPP SQVAEFLKTH TTIDRIKMFD 60 ANPDIIRAFA DTGISVTVTV ANADVPALSK LPAAQDWIAA NILPFHPQTT IRYILVGNEV 120 LYWKDRNVIA YTLPAMKTVH HALQLANLTD IKVTTPHALS FLAASEPPST GVFKKFDGEI 180 LEPILDFHRR TKTPFMVNPY PFFGYRDEVK DYAVFRPSKG LYDKHTGINY TNMFDEQMDA 240 VYSSMKKLGK GYEEDVEIVI GETGWPSAGD PNQPGISLEN ALSYNGNVVK HVNSGKGTPL 300 MPNRTFETYM FALFNENLKA SISEKNYGLF KPDFTAVYDV GVMRSTPAQA PPTSNGTTSP 360 GKAPPSDGTN PAPAEKQWCV PTSDASDEAL QKNLDYVCSL GVDCQPIQDG GVCFSPNTVR 420 SHASYAMNAY YQTYGHHYFN CDFDRTGVVT STDPSYEACS YPLTGMELLE VKKSVVKSLS 480 PRLVGLAFTE LLVAAGFVVS LLFHFVV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 19 | 333 | 330 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-23 | 377 | 448 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-41 | 377 | 461 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-84 | 26 | 340 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 1 | 461 | 4 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 0 | 1 | 461 | 4 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 18 | 455 | 19 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312098.1 | 0 | 21 | 461 | 25 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 20 | 470 | 19 | 453 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |