Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10041041 |
Family | GT4 |
Protein Properties | Length: 1515 Molecular Weight: 169976 Isoelectric Point: 8.7981 |
Chromosome | Chromosome/Scaffold: 280 Start: 677146 End: 686075 |
Description | Sucrose-phosphate synthase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 495 | 664 | 0 |
TNPHKPTILALSRPDPKKNVTTLIKAFGESQSLRELANLTLILGNRDDIEDMSNTPSAVLTTVLKLIDKYDLYGQVAYPKHHKQSQVPDIYRLAAKTKGV FVNPALVEPFGLTLIEAAAYGLPIVATENGGPVDILKALNNGILVDPHDHKAITEALLKLLADKNRWNEC |
Full Sequence |
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Protein Sequence Length: 1515 Download |
MAAGNEWIHG YLEAILDAGG ASLRNQKNVT NVKLIKLSKF EEMTTSSEQH DDADHPHTTT 60 TVATDKLFSP TTYFVEEVIN SFDESDLHMT WVKVTATRNS RQRSNRLENL CWRIWHLARR 120 KKQIAWDGAQ KLATTRAERE QGRNDVADDL SELSEGEKEP GDSIVPPESA KESDSASQSQ 180 IWTAEEKPRH LYIVLISLHG LVRGENMELG RDSDTGGQVK YAVELARALA NTSGIYRVDL 240 LTRQITSPEV DSSYGEPIEM LSYPQDGTGS CGAYIIRIPC GPPDKYIPKE SLWPYVPEFV 300 DGALNHIVNM ARALGEQVNG GVGKPTWPYV IHGHYADAGE VAAHLAGALE VPMVLTGHSL 360 GRNKFEQLLK QGRLSREDID VTYNIVRRIQ AEEFALDAAQ MVVTSTRQEI EEQWGLYDGF 420 DIKLERKLRI RRRRGVSCMG RYIPRMVVIP PGMDFSYVTT RDSSEDDLKS LVGPDKTPKK 480 VHIPPIWSEI MRFFTNPHKP TILALSRPDP KKNVTTLIKA FGESQSLREL ANLTLILGNR 540 DDIEDMSNTP SAVLTTVLKL IDKYDLYGQV AYPKHHKQSQ VPDIYRLAAK TKGVFVNPAL 600 VEPFGLTLIE AAAYGLPIVA TENGGPVDIL KALNNGILVD PHDHKAITEA LLKLLADKNR 660 WNECRKNGLK NIHHFSWPEH CRNYLSHVEH CRNNHHPKTH LEMTYMPQEP LSESLKEAED 720 QSLRFSIEGD FFKYSGSELD AETKHKKLIE AIMSNRSCSS ANYSPGRRQM LFVIAADCYD 780 SNGKPTGHMQ DIIKNTLKAA GLLIQGSSKV GFVLLTGSSL AETMEMLRSC SVNIGDFDAI 840 VCNSGGEMYY PWRDMVADTD YEAHMEYRWP GDNIKPMVIK LARVVDDDKA DDNVVGEFDE 900 AGGGSKYYSY SIKPGAKIQN VDNLRQRLRM RGFRCNLVYT QAATRLNVIP LFASRVQAMR 960 YLAVRWGIDL SNVVVIMGER GDTDCEQLLG GLHKTLIIRG SVEHDSKKLL CDQGNLKRED 1020 LLVVLDGPNI RFVDECYEAQ HITAALEALG NQVKVKAKAL REVERDVGET QTTSAALAAR 1080 FFARYSADLR PVLQFPLVSS FVQAGISEMA LFYQIPLMGI CKEVPNEPGR IGTTDCAIGL 1140 WSEGYVSLQA CRCLKAFPKD DPSKEPRLTA FLGYKAGMTH IVREVEKPGS KLHKKETCEA 1200 VTIIETPPLV VVGVVGYVKT PNGLRSLSTV WAQHLSEDVK RRFYKHWAKS KKKAFTKYSK 1260 RFETDEGKKD INAQLEKLKK YATCIRVIAH TQIRKMKGLK QKKAHLMEIQ VNGGDIAKKV 1320 DFAYSFFEKQ IPIDSVFQKD EMIDIIGVTK GKGYEGVVTR WGVTRLPRKT HRGLRKVACI 1380 GAWHPARVSY TVARAGQNGY HHRTEMNKKI YKLGKSGQDS HSAMTEYDRT EKDITPIGGF 1440 PHYGVVKEDY IMIKGCCVGP KKRVVTLRQS LLKQTSRTAL EQVNLKFIDT SSKFGHGRFQ 1500 TTVEKLKHYG RVKA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK04231 | rpl3p | 2.0e-91 | 1155 | 1495 | 344 | + 50S ribosomal protein L3P; Reviewed | ||
cd03800 | GT1_Sucrose_synthase | 2.0e-146 | 192 | 686 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
TIGR02468 | sucrsPsyn_pln | 0 | 3 | 1050 | 1094 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
PTZ00103 | PTZ00103 | 0 | 1155 | 1513 | 359 | + 60S ribosomal protein L3; Provisional | ||
TIGR02472 | sucr_P_syn_N | 0 | 191 | 689 | 500 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
Gene Ontology | |
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GO Term | Description |
GO:0003735 | structural constituent of ribosome |
GO:0005622 | intracellular |
GO:0005840 | ribosome |
GO:0005985 | sucrose metabolic process |
GO:0006412 | translation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17025.1 | 0 | 3 | 1050 | 2 | 1016 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_192750.2 | 0 | 3 | 1050 | 2 | 1048 | ATSPS4F; sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002270813.1 | 0 | 3 | 1050 | 2 | 1041 | PREDICTED: sucrose-phosphate synthase 1 [Vitis vinifera] |
RefSeq | XP_002319320.1 | 0 | 3 | 1050 | 2 | 1018 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521744.1 | 0 | 3 | 1050 | 2 | 1019 | sucrose phosphate syntase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3izr_C | 0 | 1154 | 1514 | 29 | 389 | PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome |
PDB | 3j3b_B | 0 | 1154 | 1513 | 29 | 393 | L Chain L, Structure Of The Human 60s Ribosomal Proteins |
PDB | 2zkr_b | 0 | 1154 | 1513 | 29 | 393 | DD Chain d, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map |
PDB | 3j39_B | 0 | 1154 | 1513 | 29 | 393 | H Chain H, Structure Of The D. Melanogaster 60s Ribosomal Proteins |
PDB | 4a1e_B | 0 | 1156 | 1511 | 31 | 380 | H Chain H, Structure Of The D. Melanogaster 60s Ribosomal Proteins |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794552 | 362 | 1154 | 1515 | 0 |
HO777495 | 362 | 1154 | 1515 | 0 |
CU494025 | 362 | 1154 | 1515 | 0 |
CU597637 | 362 | 1154 | 1515 | 0 |
DY615504 | 351 | 1154 | 1504 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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