| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10041110 |
| Family | GH5 |
| Protein Properties | Length: 500 Molecular Weight: 56030.9 Isoelectric Point: 6.3302 |
| Chromosome | Chromosome/Scaffold: 280 Start: 1004310 End: 1007053 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 213 | 486 | 2.09999e-41 |
| REHWNTFIVEEDFKFISQNRLNSVRIPVGWWIASDPNPPQPFVGGSLNALDNAFRWAEKYGLKVIVDLHAAPGSQNGFEHSSSRDGSQEWGLTDENIQQT VNVIDFLSARYAKSQSLYAVELINEPLSPGVSLANVEKYYKAGYDAVRRHSSTAYVVLSNRLGDSQPRELFTLASGLKGAVIDVHYYNLFSSVFDDLTPQ QNVDFVNVNRSAELNHLTISNGPLIFIGEWVAEWQVQSASKEDYKRFGQAQLEVYGRATFGWSYWTLKNVNNHW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MKSISPIHFF LSLCFAFGVS NGRLMTDTRI RAVNLGGWLV TEGWIKPSLF DGIPNKDFLD 60 GTELQLKSVT VGKYLCAENG GGSILVANRT SASGWESFRL WRNNEKSFGF RVFSGQFVSV 120 GANGILDTLA STDKDKFQIV RSSSDPNRIR IKAANGLFMQ VKTEELVTAD NKGEGDWGDQ 180 DPSVFVMRIS RRLQGEFQVT NGYGPTLAPQ VMREHWNTFI VEEDFKFISQ NRLNSVRIPV 240 GWWIASDPNP PQPFVGGSLN ALDNAFRWAE KYGLKVIVDL HAAPGSQNGF EHSSSRDGSQ 300 EWGLTDENIQ QTVNVIDFLS ARYAKSQSLY AVELINEPLS PGVSLANVEK YYKAGYDAVR 360 RHSSTAYVVL SNRLGDSQPR ELFTLASGLK GAVIDVHYYN LFSSVFDDLT PQQNVDFVNV 420 NRSAELNHLT ISNGPLIFIG EWVAEWQVQS ASKEDYKRFG QAQLEVYGRA TFGWSYWTLK 480 NVNNHWSLEW MIQNGYIQF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 3.0e-5 | 66 | 177 | 114 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-11 | 215 | 481 | 274 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-25 | 215 | 496 | 319 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064458.1 | 0 | 11 | 499 | 13 | 508 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285806.1 | 0 | 1 | 499 | 1 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002440848.1 | 0 | 30 | 499 | 64 | 537 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 30 | 499 | 43 | 514 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| RefSeq | XP_002513884.1 | 0 | 1 | 499 | 6 | 506 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-34 | 196 | 495 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 2e-34 | 196 | 495 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 2e-34 | 196 | 495 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
