| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10041170 |
| Family | GH47 |
| Protein Properties | Length: 665 Molecular Weight: 74136.1 Isoelectric Point: 5.1011 |
| Chromosome | Chromosome/Scaffold: 280 Start: 1266759 End: 1272264 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 99 | 524 | 0 |
| MFYHAFDGYMNNAFPLDELKPLSCQGEDSLGGYALTLIDSLDTLALLGDRERFTSSVDWIGKNLRFDINKTVSVFETSIRVLGGLLSAHLIASDYATGMR IPSYDNQLLNLAEDLGRRMLPAFVTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKSVRGLWARRSRLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLFIFQEAYAAAMKYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDINPAIRTHDAFFSV WRRYGFTPEGFNLATLTVQSGQKSYPLRPELIESTYWLYKATRDPRYLDVGRDMVASLQYGARCPCGYCHITDVESHQIEDHMESFFLAETVKYLWLLFD LASGADNLVENGPYKYIFSTEGHLLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 665 Download |
| MAAGRRSPNL LLLLHLLFQF LVLLFLPSAL ADGVSSLEAK HIRDEVPPFH LHSNTCVFES 60 ILVPTPSVIR VNLPVAAIDL FGFRFLDLRV WRMCLVREMF YHAFDGYMNN AFPLDELKPL 120 SCQGEDSLGG YALTLIDSLD TLALLGDRER FTSSVDWIGK NLRFDINKTV SVFETSIRVL 180 GGLLSAHLIA SDYATGMRIP SYDNQLLNLA EDLGRRMLPA FVTPTGIPFG SVNLLHGVDE 240 HESKITSTAG GGTLTLEFGV LSRLTNDPIF EQVTKKSVRG LWARRSRLNL VGAHINVFTG 300 EWTQKDAGIG TSIDSFYEYL LKAYLLFGDE EYLFIFQEAY AAAMKYLFND PWYVEVNMDS 360 AAIVWPLFNS LQAFWPGLQV LAGDINPAIR THDAFFSVWR RYGFTPEGFN LATLTVQSGQ 420 KSYPLRPELI ESTYWLYKAT RDPRYLDVGR DMVASLQYGA RCPCGYCHIT DVESHQIEDH 480 MESFFLAETV KYLWLLFDLA SGADNLVENG PYKYIFSTEG HLLPATPQIA LVREHCSYFG 540 AYCKSSDVKQ ESGRSETSNH PEANSSTSYG NWIHRGYSSD SSSFVESINP SGIGLIKGLC 600 PGLTHGQRYG ISYVDSTQRT PTSPAPEKEM VVDNPPLILI SDLSAGNSMS FRGDDDAQKS 660 SQEE* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 6.0e-77 | 96 | 528 | 470 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 8.0e-167 | 99 | 524 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26354.1 | 0 | 96 | 619 | 42 | 595 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199184.1 | 0 | 96 | 642 | 44 | 573 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280131.1 | 0 | 96 | 645 | 42 | 591 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311656.1 | 0 | 96 | 645 | 16 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517026.1 | 0 | 19 | 663 | 10 | 607 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 91 | 524 | 9 | 455 | A Chain A, Crystal Structure Of The Ku Heterodimer |
| PDB | 1fo2_A | 0 | 91 | 524 | 9 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 91 | 524 | 9 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 91 | 524 | 87 | 533 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1nxc_A | 0 | 92 | 524 | 20 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
