CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10041275
FamilyCBM20
Protein PropertiesLength: 1058 Molecular Weight: 116014 Isoelectric Point: 6.0088
ChromosomeChromosome/Scaffold: 280 Start: 1739592 End: 1746204
Descriptioncatalytics;carbohydrate kinases;phosphoglucan, water dikinases
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM2013965.8e-21
  VQLSICLRHQVQFGEHVVMLGSTKELGSWKKNVPLNWTEGGWVCDLEFKGGQSVEYKFAVVDNDKRTVWEGGENRNLQLPKEGS
Full Sequence
Protein Sequence     Length: 1058     Download
MKQLKSNSSP GRVQLSICLR HQVQFGEHVV MLGSTKELGS WKKNVPLNWT EGGWVCDLEF    60
KGGQSVEYKF AVVDNDKRTV WEGGENRNLQ LPKEGSYDML CQWNATREHI DLLPTSSEQK    120
QHKREKIVPN EASPPTHPDG EPSPFVGQWQ GKAASFMRSN EHGNRESQMK WDTSGLEGLS    180
LKLVESDQGA RNWWMKLEVV RDLIASSLDS KDRMDALWIN TGQIQCFEGG GHHRPNRHAE    240
ISRQIFRELE RISSRKDTSP QEVLVIRKIH PCLPSFKAEF TASVPLTRIR DIAHRNDIPH    300
DLKQEIKHTI QNKLHRNAGP EDLIATEAML ARITKNPGEY NAAFVEQFKI FHQELKDFFN    360
AGSLAEQLES IKESFDDKGL SALRLFLDCK KILDASKQST SIVQLMETIQ SLNGLRDTIG    420
KGLESGLRND ASDAAIAMRQ KWRLCEIGLE DYSFVLFSRF INELEAMGGA KWLTDNSESK    480
CVSSWNDPLA SLIVGVHQLA LSGWKPKECT AIENELRAWQ ERGLSEKEGD EDGRMIWALR    540
LKATLDRARR LTEEYSEALL HIFPEKVQIL GKALGVPENS VRTYTEAEIR AGVVFQVSKL    600
CTLLLKAVRS TLGSQGWDVL VPGAAVGTLI QVESIVPGSL PPSAKGPIIL VVSKADGDEE    660
VTAAGSNIVG VVLLQELPHL SHLGVRARQE KVTFVTCEDE DRVAGIKMLV GKLVRYLDPG    720
ASARGVILLA DADPLTSGAK AASCGRLASL AAVSSNVSNE KQVSASFQVP KGLVIPFGSM    780
ELALEQSKST ETFKSLIEQI EGATMEGGAL DKLCSQLQEL ICSLQPPKDV LDSVTQVFLG    840
NPCLIVRSSA NVEDLAGMSA AGLYDSIPNV SPSNAAVFGS AVSRVWGSLY TRRAVLSRRA    900
AGVSQKEATM AVLVQEMLSP ELSFVLHTLS PTDNDSNLVE AEIASGLGET LASGTRGTPW    960
RICSGKLDGS VKTLAFANFS EEMVVLGGSA ADGEVRHLTV DYSKKELTVD SGFRNQIGQR    1020
LGAIGCYLER EFGCPQDVEG CMVGEEVYIV QTRPQPH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd05467CBM209.0e-201410396+
TIGR01418PEP_synth3.0e-207381055332+
PRK06241PRK062413.0e-367651054303+
cd05818CBM20_water_dikinase5.0e-451210392+
pfam01326PPDK_N2.0e-547311055328+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0005975carbohydrate metabolic process
GO:0016301kinase activity
GO:0016310phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACZ66259.10121057891202glucan/water dikinase [Solanum tuberosum]
EMBLCBI39424.1021057661149unnamed protein product [Vitis vinifera]
RefSeqNP_198009.3051056661195ATGWD3; carbohydrate kinase/ catalytic/ phosphoglucan, water dikinase [Arabidopsis thaliana]
RefSeqXP_002265211.1021057661188PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002518612.10111056741174chloroplast alpha-glucan water dikinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1kum_A0.00002893294A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution
PDB1kul_A0.00002893294A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution
PDB1acz_A0.00002893294A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, 5 Structures
PDB1ac0_A0.00002893294A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure
PDB3bmw_A0.0000617103584681A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO77800087524010560
HO79474572338510560
EL5958704385018870
HO794745463473920.000000000006
EL595870208879065.6
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_045_00042.3Aquca_045_00042.2Aquca_045_00042.1Aquca_009_00054.3.18.103
Arabidopsis lyrata486949489476
Arabidopsis thalianaAT5G01260.2AT5G01260.1AT5G26570.2AT5G26570.1
Brachypodium distachyonBradi2g55380.3Bradi2g55380.2Bradi2g55380.1
Brassica rapaBra005693
Carica papayaevm.model.supercontig_112.34evm.model.supercontig_163.14
Capsella rubellaCarubv10001501mCarubv10001111mCarubv10000070m
Chlamydomonas reinhardtiiCre17.g719900.t1.2Cre17.g703000.t1.3Cre06.g269650.t1.2Cre12.g551200.t1.2g10103.t1
Cre02.g091750.t2.1Cre02.g091750.t1.2Cre02.g091750.t3.1Cre12.g492750.t1.3.499.578Cre12.g492750.t1.3.499.578
Cre09.g415600.t2.1Cre09.g415600.t1.3Cre12.g492750.t1.3.218.305Cre12.g492750.t1.3.218.305Cre10.g450500.t1.2
Citrus clementinaCiclev10011625mCiclev10011624mCiclev10011524mCiclev10011409mCiclev10005295m
Ciclev10005277mCiclev10004968mCiclev10010989m.24.109
Citrus sinensisorange1.1g012444morange1.1g012471morange1.1g015140morange1.1g002052m.24.109orange1.1g002050m.24.109
orange1.1g002027m.24.109
Cucumis sativusCucsa.176290.3Cucsa.176290.1
Eucalyptus grandisEucgr.K02988.2Eucgr.K02988.1Eucgr.K01679.1.16.104
Fragaria vescamrna18850.1-v1.0-hybrid
Glycine maxGlyma03g08980.1Glyma07g17931.1Glyma03g08820.1Glyma03g08930.1Glyma18g42781.1
Glyma03g08910.2Glyma1061s50.2Glyma1061s50.1Glyma03g08850.2Glyma03g08850.1
Glyma0165s00200.1Glyma01g28520.2Glyma01g28520.1Glyma03g08860.1Glyma03g08893.1
Glyma19g30580.1.16.102Glyma03g27600.1.16.103
Gossypium raimondiiGorai.006G181700.3Gorai.006G181700.2Gorai.006G181700.1Gorai.007G379100.3Gorai.007G379100.2
Gorai.007G379100.1Gorai.011G147600.3Gorai.011G147600.2Gorai.011G147600.1Gorai.010G128900.7.16.102
Gorai.010G128900.6.16.102
Linum usitatissimumLus10004826Lus10002495Lus10027767Lus10035528Lus10018226
Lus10031010.16.103Lus10035408.16.103
Malus domesticaMDP0000179937MDP0000520902MDP0000218204MDP0000256086MDP0000293128
MDP0000162900MDP0000149290.20.108
Manihot esculentacassava4.1_014927mcassava4.1_029798mcassava4.1_001086m.16.100
Medicago truncatulaMedtr4g015550.1Medtr7g088740.1.16.104
Mimulus guttatusmgv1a007499mmgv1a000923m.17.105
Oryza sativaLOC_Os01g63810.2LOC_Os01g63810.1LOC_Os05g37450.1LOC_Os07g46790.1.13.101
Panicum virgatumPavirv00009276mPavirv00009275mPavirv00011172mPavirv00049022mPavirv00069370m.17.104
Pavirv00069369m.17.104Pavirv00069371m.17.105
Physcomitrella patensPp1s127_37V6.1Pp1s103_94V6.2Pp1s103_94V6.1Pp1s49_209V6.2Pp1s49_209V6.1
Phaseolus vulgarisPhvul.010G002900.1Phvul.008G105500.1Phvul.001G117500.1
Picea abiesMA_10436655g0010
Populus trichocarpaPotri.009G044800.2Potri.009G044800.1Potri.016G114500.7Potri.016G114500.4Potri.016G114500.3
Potri.016G114500.2Potri.016G114500.1Potri.006G099200.3Potri.006G099200.2Potri.006G099200.1
Prunus persicappa007150mppa020714mppa000429mppa000782m.16.104
Ricinus communis29681.m00133229701.m00061530045.m000475.16.104
Setaria italicaSi002103mSi022447mSi028900m.11.98Si028839m.11.98Si034110m.17.104
Selaginella moellendorffii438530415024440606
Sorghum bicolorSb03g040350.1Sb09g021950.1Sb02g042100.1.13.100
Thellungiella halophilaThhalv10014134mThhalv10013736mThhalv10003634m
Vitis viniferaGSVIVT01033976001GSVIVT01025810001.16.103
Volvox carteriVocar20005575mVocar20005574mVocar20000733mVocar20001112mVocar20009467m
Vocar20004703m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)