| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10041488 |
| Family | CBM57 |
| Protein Properties | Length: 629 Molecular Weight: 69166.2 Isoelectric Point: 6.0616 |
| Chromosome | Chromosome/Scaffold: 272 Start: 320934 End: 326712 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 215 | 360 | 1.1e-22 |
| NDTDYFGRTWQSDEELRTPSMSKIVQAISTTKSISGVNQPPNYFPMKLYQSAVTGKGVLEYEIEVDAKLDYLLWFHFAEIESSVSKKGQRVFDVLVNEKN ASRVDIFAQVGNFAAYSFSYTVHNLSSTTLSVKLVPLAGFPLISGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MHHRLLLLFL LFFFSSSQSA LSSSSFPFDI SYRIDSGGPT NVTDLFNSNW LSDRFFTGGS 60 SSVVSEPLRF RHPQEKTLRY FPLSSGKKNC YILPLPSGRY YFRTFTIYDN YDGKSHSPSF 120 DASVEGTLVF SWRSPWHESL ARDGAYSDLF AFVKDGEADL CFYSIATDPP VIGSLEVRQI 180 DPLSYSSSSL GENFILVNYG RLSCGSGQWG PGFSNDTDYF GRTWQSDEEL RTPSMSKIVQ 240 AISTTKSISG VNQPPNYFPM KLYQSAVTGK GVLEYEIEVD AKLDYLLWFH FAEIESSVSK 300 KGQRVFDVLV NEKNASRVDI FAQVGNFAAY SFSYTVHNLS STTLSVKLVP LAGFPLISGI 360 ENYALVPNDM ATVPEQVVAM KALKNSLRIP DRMGWNGDPC APTNWDAWEG VTCHPNKNES 420 ALVISQIDLG SQGLKGFVSD QINLLTNLVS LNLSGNSLGG TLPEGLGQKS LIRLDLSGNQ 480 FSGPIPESLT SSSLQLMFLN DNLLEGRVPE ELYSIGMHGG SINLSGNKGL CGVPSLPDCS 540 LLWDNGHLSK GGIIGIAISS VLVFLVTLFV VYVCCIRRGS HDYDFAPSHD LTSIAAKRNR 600 YQRQKSLMLL EMESQHAKAL SSPQGLNN* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0001 | 31 | 163 | 147 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 2.0e-5 | 427 | 528 | 103 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 6.0e-15 | 201 | 360 | 177 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 3.0e-57 | 34 | 363 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 2.0e-116 | 27 | 578 | 565 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 23 | 600 | 21 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 23 | 622 | 21 | 622 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 22 | 622 | 21 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 31 | 616 | 29 | 621 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 11 | 598 | 3 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.00008 | 427 | 539 | 634 | 745 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 3rj0_A | 0.003 | 413 | 512 | 386 | 483 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 3rj0_A | 0.004 | 427 | 489 | 492 | 555 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 3riz_A | 0.00008 | 427 | 539 | 634 | 745 | A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain |
