y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042143 |
Family | GH47 |
Protein Properties | Length: 568 Molecular Weight: 64820.4 Isoelectric Point: 6.2601 |
Chromosome | Chromosome/Scaffold: 123 Start: 890451 End: 894102 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 42 | 471 | 0 |
MFYHAYENYMTYAFPHDELKPITKSYTDSLSELGNLKLEHLPRDYNGSALTLIESLSSLVIMGNNTEFERAVHWLSENLSFDVDARVNLFECNIRVLGGL VSSHILATDSKNRLIQGSYDNQLLTLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMAGETAETSTSGCGSLILEMGALSRLTGDPRYEYAALRALRKLWS MRSSLNLFGTTLDVTTGQWIEHSSGIGAGVDSFYEYLVKAHILFGKDDYWRMFQTAYQAVQKYFRHGPWYHEADMRSGTATYWQLTSLQAFWPGLQASTA NSSHREFFSVWEKFGVLPERYLLDYKIVHPTEKYYPLRPELAESTFYLYHATKDPWYLEVGEAMVNSLNLYTKVEGGFASIKDVTTMQREDHQHSFFLAE TCKYLYLLFDDSFLADRNYVFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 568 Download |
MPSLRSGTWV CLLLLLLLTS SVESDSRWEA KKLLLRDKVR AMFYHAYENY MTYAFPHDEL 60 KPITKSYTDS LSELGNLKLE HLPRDYNGSA LTLIESLSSL VIMGNNTEFE RAVHWLSENL 120 SFDVDARVNL FECNIRVLGG LVSSHILATD SKNRLIQGSY DNQLLTLAED LGRRFLPAFD 180 TPTGLPYAWI NLKYGVMAGE TAETSTSGCG SLILEMGALS RLTGDPRYEY AALRALRKLW 240 SMRSSLNLFG TTLDVTTGQW IEHSSGIGAG VDSFYEYLVK AHILFGKDDY WRMFQTAYQA 300 VQKYFRHGPW YHEADMRSGT ATYWQLTSLQ AFWPGLQAST ANSSHREFFS VWEKFGVLPE 360 RYLLDYKIVH PTEKYYPLRP ELAESTFYLY HATKDPWYLE VGEAMVNSLN LYTKVEGGFA 420 SIKDVTTMQR EDHQHSFFLA ETCKYLYLLF DDSFLADRNY VFTTEGHPLP VRSDWHDRLP 480 EAYIPSNWTY IKSPVSTHRA SAMTQQVCPA TSLNLGEGHQ PIESVCHIID TRSDHRCLMD 540 EECGVDATSC RRRSCSMSGY CGLWLRP* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 4.0e-83 | 36 | 471 | 476 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-162 | 42 | 471 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 9 | 564 | 11 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 7 | 565 | 7 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 35 | 565 | 1 | 528 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 1 | 565 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 1 | 565 | 1 | 573 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 36 | 471 | 21 | 465 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 39 | 453 | 17 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 39 | 453 | 17 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 39 | 453 | 17 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 39 | 453 | 17 | 416 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |