Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042269 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53307.4 Isoelectric Point: 7.2818 |
Chromosome | Chromosome/Scaffold: 123 Start: 1461126 End: 1462881 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 451 | 1.5e-24 |
WCVVDNNKDMSNASSRALDACSAADCTALSPGGSCSNISWPGNISYAFNSYYQQHDQRQGSCDFGGLGLVTTVDPSFGTC | |||
GH17 | 27 | 352 | 0 |
VGVNWGTTASQPLPPREVVELLKSNSITRVRLFDSDPKVLEALSGSNIGVTVGIPNSMLRSFNSSKQAVESWVHDNVTRYFSAGKSGVRIESIAVGDEPF HKMYGEQFHPYVIGAAINVELALAKANLGSDMKVVVPCSSDSIQSESGLPSKGHFRPELNKTMNELLSLLNKHHSPFYVTISPFVSFQQDKNTSLDFALF KQAARPRSDSRRTNKNSFDMSYDTVVAALSAAGFSGMDIVVAKVGWPTDGAPNASSRTAEEFMKGLMDHLRLRGKSGTPLRPKSPPMETFIFSLLDENER SIASGNFERHWGVFTFDGQAKYHVDF |
Full Sequence |
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Protein Sequence Length: 490 Download |
MYPPTLNFIF LLLAITAAAS FNCVEAVGVN WGTTASQPLP PREVVELLKS NSITRVRLFD 60 SDPKVLEALS GSNIGVTVGI PNSMLRSFNS SKQAVESWVH DNVTRYFSAG KSGVRIESIA 120 VGDEPFHKMY GEQFHPYVIG AAINVELALA KANLGSDMKV VVPCSSDSIQ SESGLPSKGH 180 FRPELNKTMN ELLSLLNKHH SPFYVTISPF VSFQQDKNTS LDFALFKQAA RPRSDSRRTN 240 KNSFDMSYDT VVAALSAAGF SGMDIVVAKV GWPTDGAPNA SSRTAEEFMK GLMDHLRLRG 300 KSGTPLRPKS PPMETFIFSL LDENERSIAS GNFERHWGVF TFDGQAKYHV DFGQGTKGLV 360 NAQNVGYLSP KWCVVDNNKD MSNASSRALD ACSAADCTAL SPGGSCSNIS WPGNISYAFN 420 SYYQQHDQRQ GSCDFGGLGL VTTVDPSFGT CRFSVELNTS GAAGSLLRIC IFWWLIPLTM 480 NNHLILMLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 264 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-15 | 371 | 439 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-30 | 371 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-67 | 27 | 352 | 327 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95444.1 | 0 | 27 | 474 | 35 | 482 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI28434.1 | 0 | 26 | 460 | 22 | 456 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200656.2 | 0 | 14 | 460 | 11 | 451 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002269108.1 | 0 | 24 | 460 | 23 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 19 | 484 | 14 | 476 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 352 | 2 | 315 | A Chain A, The Crystal Structure Of Nicotinate Phosphoribosyltransferase From Yersinia Pestis |
PDB | 3f55_C | 0 | 27 | 352 | 2 | 315 | A Chain A, The Crystal Structure Of Nicotinate Phosphoribosyltransferase From Yersinia Pestis |
PDB | 3f55_B | 0 | 27 | 352 | 2 | 315 | A Chain A, The Crystal Structure Of Nicotinate Phosphoribosyltransferase From Yersinia Pestis |
PDB | 3f55_A | 0 | 27 | 352 | 2 | 315 | A Chain A, The Crystal Structure Of Nicotinate Phosphoribosyltransferase From Yersinia Pestis |
PDB | 3em5_D | 0 | 27 | 352 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |