Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042315 |
Family | CE8 |
Protein Properties | Length: 349 Molecular Weight: 38299.3 Isoelectric Point: 9.5415 |
Chromosome | Chromosome/Scaffold: 123 Start: 1662494 End: 1664402 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 53 | 317 | 0 |
SQEAVRSVPSDNSELVFIWVKPGVYVEKVTVPADKPFITLSGTSGVSANTTVITWSQSGDNIFESATLSVFAPFFVARFLTVQNTYGSGGRAVALRVSGD RAAFYGCRILSYQDTLLDDTGNHYYSNCYIEGATDFICGDAASLFEKCHIHSVSESNGFITAQHRDVETDETGYTFLGCKITATGPTFLGRPWGAYSRVV FAYSYMASNVLPAGWSDWGDNTKQSTAFYAEYKNYGPGADKSKRVAWSKKLSTGEVSPFFSKKMI |
Full Sequence |
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Protein Sequence Length: 349 Download |
MATYVKHPPK LISLRKTTST PRNRLPFIHY PTPLLQFVHI NISTHHTKFQ FTSQEAVRSV 60 PSDNSELVFI WVKPGVYVEK VTVPADKPFI TLSGTSGVSA NTTVITWSQS GDNIFESATL 120 SVFAPFFVAR FLTVQNTYGS GGRAVALRVS GDRAAFYGCR ILSYQDTLLD DTGNHYYSNC 180 YIEGATDFIC GDAASLFEKC HIHSVSESNG FITAQHRDVE TDETGYTFLG CKITATGPTF 240 LGRPWGAYSR VVFAYSYMAS NVLPAGWSDW GDNTKQSTAF YAEYKNYGPG ADKSKRVAWS 300 KKLSTGEVSP FFSKKMIGGR DWIRAAPKLF RLGAKIVKAG SAGTPSQS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 8.0e-82 | 52 | 317 | 283 | + pectinesterase | ||
PLN02671 | PLN02671 | 4.0e-91 | 52 | 324 | 287 | + pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-94 | 52 | 329 | 290 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-105 | 51 | 324 | 290 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-163 | 54 | 324 | 271 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 54 | 337 | 60 | 339 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 54 | 343 | 78 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 54 | 343 | 21 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 54 | 331 | 41 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 52 | 339 | 56 | 341 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 52 | 333 | 21 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 52 | 325 | 17 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 6e-17 | 42 | 291 | 35 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-16 | 52 | 327 | 20 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-16 | 52 | 327 | 20 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 242 | 54 | 295 | 0 |
AM721699 | 236 | 54 | 289 | 0 |
EX283718 | 192 | 139 | 330 | 0 |
EX278581 | 192 | 139 | 330 | 0 |
GW337708 | 213 | 123 | 333 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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