Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042357 |
Family | GT47 |
Protein Properties | Length: 804 Molecular Weight: 90709.6 Isoelectric Point: 6.4283 |
Chromosome | Chromosome/Scaffold: 123 Start: 1813407 End: 1818957 |
Description | exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 351 | 704 | 0 |
KKRPLVYVYDLPPEFNSLLLEGRHFKLECVNRIYDDRNATIWTDQLYGSQIAIYESLLASAHRTLNGEDADFFFVPVLDSCIITRADDAPHLGLEEHRGI RSSFTLEIYRKAYDHIVEHYPFWNRSLGRDHIWSFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWNNITSDRRGTHPCFDPDKDLVLPA WKRPDASSLSMKLWARSLEMRKTLFYFNGNLGPAYEFGRPEASYSLGIRQKLAEEFGSSPNKDGKLGKQHVDDVIVTSMRTENYHVDLASSVFCGVLPGD GWSGRMEDSILQGCIPVVIQDGIFLPYENVLNFESFAVRIQEDEIPNLITVLRA |
Full Sequence |
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Protein Sequence Length: 804 Download |
MIAVVQKWKC SWSMTAGIAS AVALVSIVSL FLFPVDPSFD YLRIRDASKS RCVLPKGTLG 60 PGAGTGQVWQ NLKPSVDLHR RFPGDLHGAV VYRQTPWKAD IGRWLSGCDP IAKEASISEI 120 VGGRGCKDDC NGQGVCNYEL GVCRCFHGFG GEGCSERIQL KCNHPTTPEQ PYGRWVVSIC 180 ATHCDTTRAM CFCGEGTKYP NRPVAEACGF QVNVPVEPDA PKLTDWSKDD LENIFTTNSS 240 KAGWCNVDPA EAYASRVKFK EECDCKYDGL SGRFCEVPVQ SVCINQCSGH GHCRGGFCQC 300 RSGWYGIDCS IPSVLSPLSG WPRWLRPSQL DIPENGNMST KQFNLNALVK KKRPLVYVYD 360 LPPEFNSLLL EGRHFKLECV NRIYDDRNAT IWTDQLYGSQ IAIYESLLAS AHRTLNGEDA 420 DFFFVPVLDS CIITRADDAP HLGLEEHRGI RSSFTLEIYR KAYDHIVEHY PFWNRSLGRD 480 HIWSFSWDEG ACYAPKEIWN SMMLVHWGNT NSKHNHSTTA YWADNWNNIT SDRRGTHPCF 540 DPDKDLVLPA WKRPDASSLS MKLWARSLEM RKTLFYFNGN LGPAYEFGRP EASYSLGIRQ 600 KLAEEFGSSP NKDGKLGKQH VDDVIVTSMR TENYHVDLAS SVFCGVLPGD GWSGRMEDSI 660 LQGCIPVVIQ DGIFLPYENV LNFESFAVRI QEDEIPNLIT VLRAFNDTEI GFKLRNVQKL 720 WQRFVYRDSL LLEAERQKTE LGFVEDWAVE VSKLTEDDVF ATFLQILHYK LHNDPWREQV 780 GDGNKDFGVP RECSREGSKW KGP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.0009 | 285 | 309 | 27 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 2.0e-60 | 350 | 705 | 357 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29877.1 | 0 | 1 | 793 | 29 | 817 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191322.3 | 0 | 6 | 798 | 5 | 793 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002277596.1 | 0 | 1 | 793 | 1 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 2 | 793 | 1 | 788 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 68 | 795 | 13 | 726 | catalytic, putative [Ricinus communis] |