y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10042688 |
Family | GT35 |
Protein Properties | Length: 1020 Molecular Weight: 115232 Isoelectric Point: 6.0349 |
Chromosome | Chromosome/Scaffold: 67 Start: 1485636 End: 1492380 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT35 | 229 | 1014 | 0 |
ALSKLGHNLENVASQEPDAALGNGGLGRLASCFLDSLATLDYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIVRNDVIYPVKFYGKVVSDA DGKRHWIGGEDINAVAHDVPIPGYKTRTTINLRLWSTKASSNDFDLDAFNDGDHTKAYKALADAEKICHVLYPGDASEEGKILRLKQQYSLCSASLQDII ARFESRSGSNINWGNFPEKVAVQMNDTHPTLCIPELMRVLMDLKGLNWNNAWNITKRTVAYTNHTVLPEALEKWSLELMQKLLPRHVEIIKTIDEQLISE IVSEYGKEDTEMLEKKLKEMRVLENVDLPEIFADLIVKPQETSVDVSIIKLKKPPAETESVYVRDESEDGCPEEEEEEEEKVVKPPPPKMVRMANLCVVG GHAVNGVAEIHSEIVKDEVFNSFYKLWPKKFQNKTNGVTPRRWIRFCNPALSKIITEWTGSEDWVLNTERLAELRKFADNKDLQNQWRSAKRENKMKVVS FIKEKTGYTVSPDSMFDIQVKRIHEYKRQLLNILGIVYRYKKMKESTVEERKNMYAPRVCIFGGKAFATYVQAKRIVKFITDVGATINHDPEIGDLLKVI FIPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIRQEVGEDNFFLFGARANEIAGLRKERTDGKFIADPRFEEVKDYV RSGIFGGNNYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQDEVDLAYRDKKRWTRMSILNTAGSYKFSSDRTIHEYAKDIWNIK |
Full Sequence |
---|
Protein Sequence Length: 1020 Download |
MVMTTATATS SAPHPISVFK LIDFGSASAS SKSRSKFFFT RAFNSRPFRR SFFVSNVSSE 60 HSRRFNLSAA VQQADYASRN VALKYVLSGM IRIPSSLEND TFSDAEMIKC DQVDLKAGHI 120 RGSQFPETCK SSENRLPLSE DASCIAFSIK YNAEFLPSFS PGQLELPKAY LATAQIVRES 180 LIKNWNATYD LYERLDVKQA YYLSMEFLQG RALSNAIGNL ELTGPYAEAL SKLGHNLENV 240 ASQEPDAALG NGGLGRLASC FLDSLATLDY PAWGYGLRYK YGLFKQLITK DGQEEVAENW 300 LEMGNPWEIV RNDVIYPVKF YGKVVSDADG KRHWIGGEDI NAVAHDVPIP GYKTRTTINL 360 RLWSTKASSN DFDLDAFNDG DHTKAYKALA DAEKICHVLY PGDASEEGKI LRLKQQYSLC 420 SASLQDIIAR FESRSGSNIN WGNFPEKVAV QMNDTHPTLC IPELMRVLMD LKGLNWNNAW 480 NITKRTVAYT NHTVLPEALE KWSLELMQKL LPRHVEIIKT IDEQLISEIV SEYGKEDTEM 540 LEKKLKEMRV LENVDLPEIF ADLIVKPQET SVDVSIIKLK KPPAETESVY VRDESEDGCP 600 EEEEEEEEKV VKPPPPKMVR MANLCVVGGH AVNGVAEIHS EIVKDEVFNS FYKLWPKKFQ 660 NKTNGVTPRR WIRFCNPALS KIITEWTGSE DWVLNTERLA ELRKFADNKD LQNQWRSAKR 720 ENKMKVVSFI KEKTGYTVSP DSMFDIQVKR IHEYKRQLLN ILGIVYRYKK MKESTVEERK 780 NMYAPRVCIF GGKAFATYVQ AKRIVKFITD VGATINHDPE IGDLLKVIFI PDYNVSVAEL 840 LIPASELSQH ISTAGMEASG TSNMKFAMNG CVLIGTLDGA NVEIRQEVGE DNFFLFGARA 900 NEIAGLRKER TDGKFIADPR FEEVKDYVRS GIFGGNNYDE LLGSLEGNEG FGRGDYFLVG 960 KDFPSYIECQ DEVDLAYRDK KRWTRMSILN TAGSYKFSSD RTIHEYAKDI WNIKAVNVE* 1020 1080 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14985 | PRK14985 | 5.0e-145 | 619 | 1014 | 401 | + maltodextrin phosphorylase; Provisional | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 148 | 1013 | 875 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 149 | 1013 | 873 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 229 | 1014 | 792 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
COG0058 | GlgP | 0 | 170 | 1015 | 850 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 141 | 1016 | 68 | 952 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
Swiss-Prot | P27598 | 0 | 141 | 1016 | 68 | 952 | PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
Swiss-Prot | P53536 | 0 | 85 | 1019 | 37 | 1003 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002305367.1 | 0 | 137 | 1018 | 44 | 948 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 134 | 1016 | 78 | 974 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 169 | 1016 | 68 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 169 | 1016 | 68 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 2c4m_D | 0 | 168 | 1014 | 32 | 789 | A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. |
PDB | 2c4m_C | 0 | 168 | 1014 | 32 | 789 | A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. |
PDB | 2c4m_B | 0 | 168 | 1014 | 32 | 789 | A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO778303 | 862 | 169 | 1018 | 0 |
HO797178 | 395 | 620 | 1014 | 0 |
HO613954 | 513 | 506 | 1018 | 0 |
HO418036 | 588 | 355 | 939 | 0 |
HO778303 | 34 | 138 | 171 | 0.039 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|