y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042825 |
Family | GH17 |
Protein Properties | Length: 340 Molecular Weight: 37796.1 Isoelectric Point: 6.8068 |
Chromosome | Chromosome/Scaffold: 67 Start: 2269143 End: 2270343 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 35 | 339 | 0 |
LGINYGQVGNNLPQPDKVMDLLASLRVTKTRIYDTNPQILTAFANSQIELIVTVENQMLSTLTDRQQALQWVTTHIKPYFPATRITGISVGNEVFTADND DTTLLSNLVPAIVNIHTALVQLGLDRYIQISTAHSLAVLDQSYPPSAGTFKQEVSSAMSQFLQFLSATKSPFWINAYPYFAYKDDPATIPLDYVLFNPNQ GMVDPYTGLHYDNMLYAMVDAVIFAMAKLGFGRIEVRVSETGWPSRGDANEVGATVQNAASYNKNLLRRQLGNQGTPLRPRRRLEVYLFALFNEDMKPGP TSERN |
Full Sequence |
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Protein Sequence Length: 340 Download |
MHQQSSSHKL FVVLVFLFPL SLSSDYGVIK TVTSLGINYG QVGNNLPQPD KVMDLLASLR 60 VTKTRIYDTN PQILTAFANS QIELIVTVEN QMLSTLTDRQ QALQWVTTHI KPYFPATRIT 120 GISVGNEVFT ADNDDTTLLS NLVPAIVNIH TALVQLGLDR YIQISTAHSL AVLDQSYPPS 180 AGTFKQEVSS AMSQFLQFLS ATKSPFWINA YPYFAYKDDP ATIPLDYVLF NPNQGMVDPY 240 TGLHYDNMLY AMVDAVIFAM AKLGFGRIEV RVSETGWPSR GDANEVGATV QNAASYNKNL 300 LRRQLGNQGT PLRPRRRLEV YLFALFNEDM KPGPTSERN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 266 | 332 | 68 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-90 | 35 | 339 | 306 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA16806.1 | 0 | 12 | 339 | 12 | 336 | beta-1, 3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 16 | 339 | 15 | 336 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 32 | 339 | 1 | 306 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 12 | 339 | 8 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 14 | 339 | 4 | 325 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 35 | 331 | 2 | 292 | A Chain A, Lip5(mit)2 |
PDB | 3f55_C | 0 | 35 | 331 | 2 | 292 | A Chain A, Lip5(mit)2 |
PDB | 3f55_B | 0 | 35 | 331 | 2 | 292 | A Chain A, Lip5(mit)2 |
PDB | 3f55_A | 0 | 35 | 331 | 2 | 292 | A Chain A, Lip5(mit)2 |
PDB | 3em5_D | 0 | 35 | 331 | 2 | 292 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |