| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10042830 |
| Family | GH47 |
| Protein Properties | Length: 609 Molecular Weight: 67923.4 Isoelectric Point: 6.3597 |
| Chromosome | Chromosome/Scaffold: 67 Start: 2285893 End: 2288982 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 121 | 605 | 0 |
| AFIYAWSGYRKYAMGYDELMPLSQRGTDGLGGLGATIVDALDTAMLMGADDIVSEAGSWVETHLPDLIKKKGQVNLFETTIRVLGGLLSAYHLSGGEKGA NSMGKGPNPVVYLDTAKDLADRLLLAFTSSSTPIPFSDVILHDPSAHRAPDGLSSTSEVSTLQLEFNYLSTLSGDPKYSMVAMKVLEHMKDLQKVDGLVP IYISPDSGQFSGENIRLGSRGDSYYEYLIKVWLQQGRNRDTKFTYLHDMYTEAMNGVRHRLVKKSIPNGLVFVGELPYGPNGAFSPKMDHLVCFLPGTLA LGATKGFTKKKATNENLMTFEDFENLKLAEDLAKTCFEMYSVTSTGLAPEIVYFHTEEYSEDGLGGGNKSSEYIDDIIIKPLDRHNLLRPETVESLFVLY RITEDPKYREWGWQIFEAFEKCTKVDSGGYSSLDDVTNLPPRRRDKMETFFLGETLKYLYLLFGDSSVIPLDKFVFNTEAHPFPI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 609 Download |
| MVEFQFFLLT KNKMRDCASF STGKFLALLL IFGFGYLMLT HSSTAHSVSV RRADKLSVNG 60 EAKNVTGDNA RFGGIWRKPP RLPPRLPPDE KASHNDSSTH EAAKINLDSR WVDRQQKVKE 120 AFIYAWSGYR KYAMGYDELM PLSQRGTDGL GGLGATIVDA LDTAMLMGAD DIVSEAGSWV 180 ETHLPDLIKK KGQVNLFETT IRVLGGLLSA YHLSGGEKGA NSMGKGPNPV VYLDTAKDLA 240 DRLLLAFTSS STPIPFSDVI LHDPSAHRAP DGLSSTSEVS TLQLEFNYLS TLSGDPKYSM 300 VAMKVLEHMK DLQKVDGLVP IYISPDSGQF SGENIRLGSR GDSYYEYLIK VWLQQGRNRD 360 TKFTYLHDMY TEAMNGVRHR LVKKSIPNGL VFVGELPYGP NGAFSPKMDH LVCFLPGTLA 420 LGATKGFTKK KATNENLMTF EDFENLKLAE DLAKTCFEMY SVTSTGLAPE IVYFHTEEYS 480 EDGLGGGNKS SEYIDDIIIK PLDRHNLLRP ETVESLFVLY RITEDPKYRE WGWQIFEAFE 540 KCTKVDSGGY SSLDDVTNLP PRRRDKMETF FLGETLKYLY LLFGDSSVIP LDKFVFNTEA 600 HPFPIKGM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 3.0e-175 | 114 | 605 | 495 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 121 | 605 | 488 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 97 | 606 | 48 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 4 | 606 | 28 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 8 | 608 | 32 | 635 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 8 | 607 | 32 | 630 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 9 | 607 | 33 | 621 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 114 | 605 | 10 | 456 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 1fo2_A | 0 | 114 | 605 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 114 | 605 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 114 | 605 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 113 | 605 | 4 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
