Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10043075 |
Family | CBM43 |
Protein Properties | Length: 501 Molecular Weight: 53963.1 Isoelectric Point: 6.5075 |
Chromosome | Chromosome/Scaffold: 25 Start: 1021857 End: 1023476 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 455 | 4.1e-22 |
WCVLSPQANVADPATLDSSINYACTYADCTSLGAGSSCGTLDGSGNASYAFNMYYQTMNQRKGACNFSNGLSLVTTLDPTVGKC | |||
GH17 | 33 | 350 | 0 |
AANWGTQSTHPLPGDIVVKLLKENGFDKVKLFEADQAALKALGNSGIQVMVGIPNDLLAPLSSSVQAAIDWVQQNVSNYISKDGVNIRHVAVGNEPFLKT YNDRFVQTTFPALKNIQAALIKAGLGRQVKVTVPLNADVYQSDNGLPSGGSFRPDIHDLMISIIKFLNENNCPLTFNIYPFLSLYADPHFPKEYAYFDGK ADPLVDGSISYTNVFDANFDTLVAALEKSGFPSMPVIVGEVGWPTDGDSNANVENAKRFNQGLIDRILQGHGTPRRSTPPDVYIFSLIDEDHKSIDPGNF ERHWGVFNYDGSIKYQLN |
Full Sequence |
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Protein Sequence Length: 501 Download |
MASHGNKSGM IFLVVWLISV EGGKTAAAAA GLAANWGTQS THPLPGDIVV KLLKENGFDK 60 VKLFEADQAA LKALGNSGIQ VMVGIPNDLL APLSSSVQAA IDWVQQNVSN YISKDGVNIR 120 HVAVGNEPFL KTYNDRFVQT TFPALKNIQA ALIKAGLGRQ VKVTVPLNAD VYQSDNGLPS 180 GGSFRPDIHD LMISIIKFLN ENNCPLTFNI YPFLSLYADP HFPKEYAYFD GKADPLVDGS 240 ISYTNVFDAN FDTLVAALEK SGFPSMPVIV GEVGWPTDGD SNANVENAKR FNQGLIDRIL 300 QGHGTPRRST PPDVYIFSLI DEDHKSIDPG NFERHWGVFN YDGSIKYQLN MGGNGGKGLV 360 PAKGVRYLKR QWCVLSPQAN VADPATLDSS INYACTYADC TSLGAGSSCG TLDGSGNASY 420 AFNMYYQTMN QRKGACNFSN GLSLVTTLDP TVGKCRFEVM IDTGKHQLPP PTHSSSSKPG 480 NIEYVISVVV GFMFILYGAS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-9 | 207 | 342 | 146 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-15 | 371 | 439 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-26 | 371 | 457 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-77 | 49 | 350 | 304 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27737.1 | 0 | 31 | 498 | 24 | 484 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197587.1 | 0 | 1 | 478 | 1 | 482 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277217.1 | 0 | 33 | 498 | 18 | 476 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309443.1 | 0 | 31 | 459 | 1 | 425 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516181.1 | 0 | 4 | 499 | 18 | 501 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 40 | 339 | 8 | 294 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 1aq0_B | 0 | 40 | 339 | 8 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 40 | 339 | 8 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 45 | 351 | 14 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 36 | 351 | 6 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |