Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_101171g0010 |
Family | PL1 |
Protein Properties | Length: 339 Molecular Weight: 37242.9 Isoelectric Point: 8.2645 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 82 | 253 | 7.00649e-45 |
AVIQTEPLWIIFQRDMVIQLKEELIMNGYKTIDGRGANVHIANGPCITVQYVTDIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTKSDGDGVSIFGASNIW VDHCSLSSCTDGLIYAIRGSTGITISNNFMTHHDKVMLLGHNGDYTQDVNMQVTVAFNHFGEGLVQRMPSQG |
Full Sequence |
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Protein Sequence Length: 339 Download |
MYYRSINSSR RELSYLSCGT GNPIGDCWRC DPDWENNRKK LADCAIGFGR KAIGGQNGRF 60 YVATDPNDYD AVNPRPGTLR HAVIQTEPLW IIFQRDMVIQ LKEELIMNGY KTIDGRGANV 120 HIANGPCITV QYVTDIIIHG IHIHDCKPAG NAMVRDSPGH YGWRTKSDGD GVSIFGASNI 180 WVDHCSLSSC TDGLIYAIRG STGITISNNF MTHHDKVMLL GHNGDYTQDV NMQVTVAFNH 240 FGEGLVQRMP SQGNRFLAPV SRSSKEVTKR ENTPERVWTQ WNWRSEGDLM LNGAFFTPSG 300 VGASSSYAKA SSLSARPSSL VASLTGNAGV LTCRKGSAC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 9.0e-13 | 111 | 250 | 150 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 3.0e-41 | 102 | 252 | 174 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 8.0e-46 | 96 | 252 | 168 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 339 | 67 | 436 | unknown [Picea sitchensis] |
GenBank | ADB90475.1 | 0 | 3 | 339 | 44 | 411 | pectate lyase [Gossypium herbaceum] |
GenBank | ADB90476.1 | 0 | 3 | 339 | 44 | 411 | pectate lyase [Gossypium raimondii] |
DDBJ | BAI94495.1 | 0 | 3 | 339 | 38 | 407 | pectate lyase [Dianthus caryophyllus] |
EMBL | CBI14899.1 | 0 | 3 | 339 | 36 | 403 | unnamed protein product [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 22 | 332 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 22 | 332 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jta_A | 0.000002 | 112 | 250 | 90 | 243 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jrg_B | 0.000002 | 112 | 250 | 90 | 243 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1jrg_A | 0.000002 | 112 | 250 | 90 | 243 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX333160 | 246 | 5 | 250 | 0 |
EX335774 | 294 | 5 | 267 | 0 |
FG606120 | 326 | 3 | 297 | 0 |
ES868163 | 250 | 1 | 250 | 0 |
DV985744 | 311 | 55 | 334 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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