Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_101730g0010 |
Family | AA3 |
Protein Properties | Length: 272 Molecular Weight: 30270.2 Isoelectric Point: 8.7889 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 39 | 268 | 7.3e-25 |
XXXXFNIPLVLHLPFVGQGIQDNPRATVTLQSPTPLEISSIQAVGLLNGSQTYIYSGSVIQPASSVNGNTSPQPKNVYAGRIFEKLAFSLSRGDLWLLSK DPRDNPSVRYNYYFHPLDLKRCVDSVRVMAKILETRSLQRFTFAAANDSSHEFHFIGPVLPKSTRDDAATVKFCRDTLNTMWHFHGGCHVGSVINQRYQV NGVERLRIVDGSMFTDAPGTNTQATTMMHA |
Full Sequence |
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Protein Sequence Length: 272 Download |
MDILFEVLSD APMPNSRLVA NGSSQRTTYM AKGXXXXXXX XXFNIPLVLH LPFVGQGIQD 60 NPRATVTLQS PTPLEISSIQ AVGLLNGSQT YIYSGSVIQP ASSVNGNTSP QPKNVYAGRI 120 FEKLAFSLSR GDLWLLSKDP RDNPSVRYNY YFHPLDLKRC VDSVRVMAKI LETRSLQRFT 180 FAAANDSSHE FHFIGPVLPK STRDDAATVK FCRDTLNTMW HFHGGCHVGS VINQRYQVNG 240 VERLRIVDGS MFTDAPGTNT QATTMMHAGM WE |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 1.0e-14 | 43 | 266 | 261 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
PRK02106 | PRK02106 | 6.0e-16 | 127 | 268 | 146 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 1.0e-24 | 128 | 268 | 146 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
PLN02785 | PLN02785 | 1.0e-54 | 20 | 266 | 286 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22756.1 | 0 | 43 | 266 | 48 | 277 | unknown [Picea sitchensis] |
GenBank | ABK25456.1 | 0 | 43 | 266 | 339 | 543 | unknown [Picea sitchensis] |
RefSeq | XP_002277531.1 | 0 | 43 | 266 | 308 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 43 | 266 | 278 | 504 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454481.1 | 0 | 20 | 266 | 281 | 566 | hypothetical protein SORBIDRAFT_04g031910 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 2e-35 | 43 | 266 | 280 | 504 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3gdp_A | 2e-35 | 43 | 266 | 280 | 504 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3gdn_B | 2e-35 | 43 | 266 | 280 | 504 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 2e-35 | 43 | 266 | 280 | 504 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 2e-35 | 43 | 266 | 280 | 504 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO364397 | 224 | 43 | 266 | 0 |
GE480478 | 224 | 43 | 266 | 0 |
CO169655 | 222 | 45 | 266 | 0 |
DV974032 | 224 | 43 | 266 | 0 |
GO362815 | 210 | 43 | 247 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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