| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_101764g0010 |
| Family | GH28 |
| Protein Properties | Length: 461 Molecular Weight: 49989.1 Isoelectric Point: 6.287 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 91 | 418 | 0 |
| QAACQVESAVVLIPAGYSFMIQSTTFHGPCKDGMTFQVDGVLNAPDGPDCWAKNSSKLQWIMFERTDGLSVQGNGLIDGRGENWWNLPCKPHRGPNGTTL PGPCESPTAIRFFDSSRLALRNLRIKNSPQFHVRFDECHSVLVDGIIIQSPALSPNTDGVHVSGTQSVRIHNSRISNGDDCISIVSGGSDIDIQNVTCGP SHGISIGGLGNHYSQACVSNISVSNTVIKDSDNGLRIKTWQGGIGSVTGVTFQNIYVQNVRNPIIIDQFYCFTKGCKNESEAVYVSDITYKKIRGTYDVR SPPMHFACSDAIPCTNITLANIELFPAQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 461 Download |
| MEALVCSSHS RGLILLVSFI YLISAAFRGV HARLHFHKNS SKHGDEGNAF APEGSLNYSS 60 NNCDSTFNVQ SYGAQGDGVT DDSQAFQLAW QAACQVESAV VLIPAGYSFM IQSTTFHGPC 120 KDGMTFQVDG VLNAPDGPDC WAKNSSKLQW IMFERTDGLS VQGNGLIDGR GENWWNLPCK 180 PHRGPNGTTL PGPCESPTAI RFFDSSRLAL RNLRIKNSPQ FHVRFDECHS VLVDGIIIQS 240 PALSPNTDGV HVSGTQSVRI HNSRISNGDD CISIVSGGSD IDIQNVTCGP SHGISIGGLG 300 NHYSQACVSN ISVSNTVIKD SDNGLRIKTW QGGIGSVTGV TFQNIYVQNV RNPIIIDQFY 360 CFTKGCKNES EAVYVSDITY KKIRGTYDVR SPPMHFACSD AIPCTNITLA NIELFPAQGQ 420 MIDDPFCWNA YGTIQTLTIP PVTCLHDGNP LSTIENIHSC S 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03003 | PLN03003 | 2.0e-67 | 65 | 445 | 389 | + Probable polygalacturonase At3g15720 | ||
| PLN02188 | PLN02188 | 4.0e-71 | 50 | 441 | 399 | + polygalacturonase/glycoside hydrolase family protein | ||
| pfam00295 | Glyco_hydro_28 | 4.0e-78 | 99 | 414 | 317 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 2.0e-88 | 65 | 414 | 354 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 2.0e-104 | 67 | 441 | 378 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI37004.1 | 0 | 60 | 456 | 82 | 479 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263668.1 | 0 | 59 | 456 | 75 | 472 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272733.1 | 0 | 60 | 456 | 63 | 451 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320271.1 | 0 | 60 | 456 | 36 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515219.1 | 0 | 67 | 456 | 142 | 532 | Polygalacturonase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 6e-23 | 81 | 383 | 37 | 333 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1rmg_A | 2e-22 | 59 | 433 | 13 | 356 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 1nhc_F | 1e-21 | 166 | 414 | 79 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 1e-21 | 166 | 414 | 79 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_D | 1e-21 | 166 | 414 | 79 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
