Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10205415g0010 |
Family | PL1 |
Protein Properties | Length: 309 Molecular Weight: 34001.3 Isoelectric Point: 6.6928 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 89 | 296 | 0 |
AVIQTEPLWIIFQRDMVIQLKEQLFMNSHKTIDGRGANVHIANGACITVEHVTNIIIHGIHIHDCKPAGNAIVRDSPGHYGWRSISDGDGISILGASNIW VDHCSLSSCTDGLIDATRGSTAITISNNFMTHHDKVMLLGHSDDYTQDVNMQVTVAFNHFGEGLVQRMPRCRHGNFHVVNNDYTHWGMYAIGGSANPTIN SQGNRFLA |
Full Sequence |
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Protein Sequence Length: 309 Download |
MSGYRSVLAL LWIFFIRSNA AKSSGTLDKL TGTVVGQPEM FDEAKHAAEP VVEMVERNAI 60 GGQNGRFYVV TDPNDYDAVN PRPGTLRHAV IQTEPLWIIF QRDMVIQLKE QLFMNSHKTI 120 DGRGANVHIA NGACITVEHV TNIIIHGIHI HDCKPAGNAI VRDSPGHYGW RSISDGDGIS 180 ILGASNIWVD HCSLSSCTDG LIDATRGSTA ITISNNFMTH HDKVMLLGHS DDYTQDVNMQ 240 VTVAFNHFGE GLVQRMPRCR HGNFHVVNND YTHWGMYAIG GSANPTINSQ GNRFLAPVDH 300 SSKEVNVAF |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 9.0e-25 | 116 | 294 | 193 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 1.0e-70 | 114 | 294 | 189 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 8.0e-76 | 103 | 297 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 305 | 1 | 364 | unknown [Picea sitchensis] |
GenBank | ABV32549.1 | 0 | 57 | 305 | 93 | 341 | pectase lyase [Prunus persica] |
DDBJ | BAB10560.1 | 0 | 57 | 305 | 88 | 336 | pectate lyase [Arabidopsis thaliana] |
RefSeq | NP_568967.1 | 0 | 57 | 305 | 110 | 358 | pectate lyase family protein [Arabidopsis thaliana] |
RefSeq | XP_002285340.1 | 0 | 57 | 305 | 83 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 60 | 305 | 33 | 279 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 60 | 305 | 33 | 279 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pe9_B | 2e-16 | 107 | 307 | 78 | 300 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pe9_A | 2e-16 | 107 | 307 | 78 | 300 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1ooc_B | 2e-16 | 107 | 307 | 78 | 300 | A Chain A, Mutations In The T1.5 Loop Of Pectate Lyase A |