Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10213520g0010 |
Family | CBM43 |
Protein Properties | Length: 190 Molecular Weight: 20726.8 Isoelectric Point: 3.9769 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 85 | 166 | 8.2e-30 |
CISMDGADPKLLQAALDWACGPRKFDCTALLQVQSCYDPDNVQQNASYAFDSYYHETGMAAGACDFNGVATITTTDPSHDSC |
Full Sequence |
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Protein Sequence Length: 190 Download |
MSDLNFTNIP VVVSETGWPS KGDQSEPAAT VDNADTYNSN LVRHVLNNTG TPKHPGIPVN 60 TYIYELFNED LRIVLANDTT NQTYCISMDG ADPKLLQAAL DWACGPRKFD CTALLQVQSC 120 YDPDNVQQNA SYAFDSYYHE TGMAAGACDF NGVATITTTD PSHDSCIYPG SIGSNGLWPT 180 SPTTQFWEPL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 7 | 70 | 65 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-16 | 83 | 155 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-20 | 1 | 70 | 70 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 2.0e-34 | 83 | 168 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 1 | 175 | 249 | 451 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 1 | 179 | 230 | 436 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 1 | 179 | 244 | 450 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 1 | 176 | 249 | 452 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 1 | 173 | 260 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0.00000000000003 | 8 | 72 | 229 | 290 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 3ur8_A | 0.00000000000003 | 8 | 72 | 229 | 290 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 3ur7_B | 0.00000000000003 | 8 | 72 | 229 | 290 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0.00000000000003 | 8 | 72 | 229 | 290 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0.0000000000003 | 8 | 72 | 229 | 290 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR571559 | 204 | 1 | 176 | 0 |
GO371467 | 197 | 1 | 169 | 0 |
DR060732 | 206 | 12 | 189 | 0 |
CO479005 | 173 | 18 | 162 | 0 |
DR571559 | 15 | 176 | 190 | 2 |
Sequence Alignments (This image is cropped. Click for full image.) |
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