Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10353668g0010 |
Family | PL1 |
Protein Properties | Length: 422 Molecular Weight: 47053.3 Isoelectric Point: 9.0459 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 134 | 342 | 0 |
AVIQTEPLWIIFRNDMVIQLKEELIMNSFKTIDGRGANVHIGNGPCITVQNVTNIIIHGIHIHDCKRAGNAMVKDSPQHTGWRTVSDGDGISIFTGRHIW VDHCSMSNCEDGLIDAVKSSTHITISNNYFTHHDKVMLLGHSDNYSEDRIMQVTVAFNHFGQGLTQRMPRCRFGYFHVLNNDYSEWKMYAIGGSANPTIL SQGNRFKAS |
Full Sequence |
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Protein Sequence Length: 422 Download |
MLLIGILCCV HGGAAKPFGS KRGEKFMGRR KVAPGNITRV MFPVAKDPGN ATQIVRDRST 60 INSTRRGLLS CATGNPIDDC WRCDPNWERN RKRLADCGIG FGRDAIGGKN GKVYVVTDPR 120 DDPVNPSNGT LRHAVIQTEP LWIIFRNDMV IQLKEELIMN SFKTIDGRGA NVHIGNGPCI 180 TVQNVTNIII HGIHIHDCKR AGNAMVKDSP QHTGWRTVSD GDGISIFTGR HIWVDHCSMS 240 NCEDGLIDAV KSSTHITISN NYFTHHDKVM LLGHSDNYSE DRIMQVTVAF NHFGQGLTQR 300 MPRCRFGYFH VLNNDYSEWK MYAIGGSANP TILSQGNRFK ASANRFTKEV TKRQNADQTE 360 WKNWNWRSED DVLLNDAYFT QSGSPEYAAY ATAYSITPKS SALVGELTRN AGVLSCKRAT 420 RC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-32 | 161 | 413 | 272 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 1.0e-74 | 154 | 339 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 6.0e-80 | 148 | 342 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR17766.1 | 0 | 1 | 422 | 10 | 426 | unknown [Picea sitchensis] |
GenBank | ABR17909.1 | 0 | 1 | 422 | 10 | 429 | unknown [Picea sitchensis] |
GenBank | ABV32549.1 | 0 | 43 | 422 | 31 | 413 | pectase lyase [Prunus persica] |
DDBJ | BAE48664.1 | 0 | 43 | 422 | 31 | 413 | Pectate lyase [Prunus mume] |
RefSeq | XP_002322215.1 | 0 | 46 | 422 | 26 | 403 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 75 | 415 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 75 | 415 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 3e-22 | 143 | 339 | 50 | 246 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1pe9_B | 3e-17 | 164 | 412 | 90 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1pe9_A | 3e-17 | 164 | 412 | 90 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |