Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_103716g0010 |
Family | PL1 |
Protein Properties | Length: 433 Molecular Weight: 48251.3 Isoelectric Point: 8.3868 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 148 | 340 | 0 |
AVIQSEPLWIVFQKDMVIQLKEELIMNSYKTIDGRGANVHIANGACITVQYVTHIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTKSDGDGVSIFGGSNIW VDHCSLSNCADGLIDAIHGSTAITISNNFMTHHDKVMLLGHSDEYTQDVNMQITVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGG |
Full Sequence |
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Protein Sequence Length: 433 Download |
MSGYRCLLAL LVLLCIFCAR SSAGKSFEIF EKLTAVVVGQ PAVVSGSKDT QQSATKYVEE 60 PERVVGMVER SINSSRRALS YLSCGTGNPV DDCWRCDPDW ENNRKRLADC AIGFGRNAIG 120 GKNGRFYVVT DPSDYDAVNP RPGTLRHAVI QSEPLWIVFQ KDMVIQLKEE LIMNSYKTID 180 GRGANVHIAN GACITVQYVT HIIIHGIHIH DCKPAGNAMV RDSPGHYGWR TKSDGDGVSI 240 FGGSNIWVDH CSLSNCADGL IDAIHGSTAI TISNNFMTHH DKVMLLGHSD EYTQDVNMQI 300 TVAFNHFGEG LVQRMPRCRH GYFHVVNNDY THWEMYAIGG MELEVRRRPD VERGVLYSIG 360 RGRIVKLCKG FESLGKAIVS CRLAHRERRR SDMPKRLPLL TPTTTVLPQP PSIFRPFAIS 420 CSFFLRVATF LSV |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-24 | 120 | 339 | 236 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 6.0e-62 | 168 | 340 | 195 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 3.0e-67 | 162 | 340 | 190 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 340 | 1 | 340 | unknown [Picea sitchensis] |
GenBank | ABR17791.1 | 0 | 50 | 400 | 25 | 412 | unknown [Picea sitchensis] |
GenBank | ABR18471.1 | 0 | 4 | 340 | 9 | 345 | unknown [Picea sitchensis] |
GenBank | ABV32549.1 | 0 | 59 | 340 | 34 | 317 | pectase lyase [Prunus persica] |
RefSeq | XP_002322215.1 | 0 | 41 | 340 | 17 | 307 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 88 | 340 | 2 | 255 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 88 | 340 | 2 | 255 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 0.000000000000002 | 157 | 331 | 50 | 214 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1bn8_A | 0.0000000000002 | 125 | 330 | 108 | 316 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 2bsp_A | 0.0000000000004 | 125 | 330 | 108 | 316 | A Chain A, Bacillus Subtilis Pectate Lyase R279k Mutant |