| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10426401g0010 |
| Family | PL1 |
| Protein Properties | Length: 217 Molecular Weight: 24739.2 Isoelectric Point: 8.836 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 26 | 204 | 0 |
| VFEVSGIIQLSSYLRVSSYKTIDGRGQRIKLMGKGLQLKECEHVIINNLEFEGGRGHDIDGIQIKPNSRHIWIDRCSLSNYDDGLIDITRGSTDITISRC HFFNHDKTMLIGADPSNVGDRRIKVTIHHCFFDGTNQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQILSQCNIYEA | |||
| Full Sequence |
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| Protein Sequence Length: 217 Download |
| MLVTYADSGP GTLREGCKQK EPLWIVFEVS GIIQLSSYLR VSSYKTIDGR GQRIKLMGKG 60 LQLKECEHVI INNLEFEGGR GHDIDGIQIK PNSRHIWIDR CSLSNYDDGL IDITRGSTDI 120 TISRCHFFNH DKTMLIGADP SNVGDRRIKV TIHHCFFDGT NQRHPRVRFG KVHLYNNYTR 180 NWGIYAVCAS VESQILSQCN IYEAGNKKVA FKYLTEK |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00295 | Glyco_hydro_28 | 0.005 | 11 | 143 | 147 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| pfam00544 | Pec_lyase_C | 8.0e-40 | 20 | 200 | 201 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| COG3866 | PelB | 1.0e-46 | 22 | 211 | 209 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| smart00656 | Amb_all | 3.0e-65 | 39 | 206 | 180 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16354.1 | 0 | 2 | 217 | 96 | 311 | unknown [Picea sitchensis] |
| EMBL | CAN80964.1 | 0 | 2 | 217 | 82 | 297 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI32661.1 | 0 | 2 | 217 | 38 | 253 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277576.1 | 0 | 2 | 217 | 82 | 297 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323433.1 | 0 | 2 | 217 | 39 | 254 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 6e-39 | 10 | 204 | 55 | 270 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 6e-39 | 10 | 204 | 55 | 270 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 1e-27 | 25 | 202 | 50 | 246 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1vbl_A | 6e-25 | 41 | 202 | 130 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3vmw_A | 5e-20 | 46 | 203 | 82 | 247 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DR451098 | 216 | 2 | 217 | 0 |
| GW753086 | 210 | 1 | 210 | 0 |
| EX435559 | 205 | 2 | 206 | 0 |
| FE520612 | 208 | 1 | 208 | 0 |
| EX934213 | 213 | 2 | 214 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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