| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10426591g0010 |
| Family | GH28 |
| Protein Properties | Length: 181 Molecular Weight: 19407.4 Isoelectric Point: 6.4897 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH28 | 67 | 162 | 1.8e-22 |
| AWNAACTSSSDSIFLVPHGKTYLVKPISFSGPCKTVDLTAQISGKIVAPADPCKWNPKERSVWLEFSKVQGLTIHGGGIIDGSGEKWWADVPKCPN | |||
| Full Sequence |
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| Protein Sequence Length: 181 Download |
| MVSRMSENLS LSMRICIVSL LLCTGFSTEG PLIKSLDLDA SAAVFSVDSY GAKGNGVSDD 60 SQAFLAAWNA ACTSSSDSIF LVPHGKTYLV KPISFSGPCK TVDLTAQISG KIVAPADPCK 120 WNPKERSVWL EFSKVQGLTI HGGGIIDGSG EKWWADVPKC PNGKITETFL QYSPELIMKL 180 L |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 2.0e-26 | 40 | 164 | 125 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN02218 | PLN02218 | 4.0e-27 | 46 | 159 | 116 | + polygalacturonase ADPG | ||
| PLN03003 | PLN03003 | 2.0e-27 | 36 | 154 | 120 | + Probable polygalacturonase At3g15720 | ||
| PLN03010 | PLN03010 | 4.0e-32 | 45 | 165 | 125 | + polygalacturonase | ||
| PLN02793 | PLN02793 | 4.0e-37 | 41 | 155 | 115 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK23977.1 | 0 | 1 | 155 | 1 | 168 | unknown [Picea sitchensis] |
| GenBank | ABK26513.1 | 0 | 1 | 155 | 1 | 155 | unknown [Picea sitchensis] |
| GenBank | ABR18059.1 | 3e-37 | 41 | 180 | 85 | 240 | unknown [Picea sitchensis] |
| GenBank | ACN40008.1 | 0 | 1 | 155 | 1 | 168 | unknown [Picea sitchensis] |
| RefSeq | NP_173760.2 | 2e-34 | 44 | 155 | 66 | 175 | polygalacturonase [Arabidopsis thaliana] |
| Signal Peptide | ||||
|---|---|---|---|---|
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| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX393762 | 155 | 1 | 155 | 0 |
| EX370942 | 155 | 1 | 155 | 0 |
| EX372505 | 155 | 1 | 155 | 0 |
| EX422323 | 155 | 1 | 155 | 0 |
| EX368009 | 155 | 1 | 155 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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