Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10426822g0020 |
Family | PL1 |
Protein Properties | Length: 376 Molecular Weight: 41223.4 Isoelectric Point: 7.3911 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 124 | 304 | 0 |
VLKEELIMNSYKTIDGRGANVHIANGPCITVQHVTNIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGASNIWVDHCSLSSCTDGLIDAIR GSTGITISNNFMTHHDKVMLLGHNDDYTQDVNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSSSKEV |
Full Sequence |
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Protein Sequence Length: 376 Download |
MSVYPSVLAL LSLLGVFCIR SEAAASFGIL EKLSAAVLGR PDTKHGQEPA TKHVEEPERV 60 VEMVERSINS SRRELSYLSC GTGNPIDDCW RCDPDWENNR KRLANCAIGF GRNAIGGQNG 120 RFYVLKEELI MNSYKTIDGR GANVHIANGP CITVQHVTNI IIHGIHIHDC KPAGNAMVRD 180 SPGHYGWRTR SDGDGVSIFG ASNIWVDHCS LSSCTDGLID AIRGSTGITI SNNFMTHHDK 240 VMLLGHNDDY TQDVNMQVTV AFNHFGEGLV QRMPRCRHGY FHVVNNDYTH WEMYAIGGSS 300 SKEVTKREYT PESVWRHWNW RSEGDLMLNG AFFTPSGAGA SSSYAKASSL SARPSSLVAS 360 VTGNAGVLTC RKGSPC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-24 | 133 | 302 | 183 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 4.0e-69 | 126 | 301 | 199 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-72 | 128 | 301 | 183 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 376 | 1 | 436 | unknown [Picea sitchensis] |
GenBank | ABV32549.1 | 0 | 55 | 376 | 34 | 413 | pectase lyase [Prunus persica] |
EMBL | CBI14899.1 | 0 | 50 | 376 | 21 | 403 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002322215.1 | 0 | 54 | 376 | 25 | 403 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526952.1 | 0 | 54 | 376 | 27 | 396 | Pectate lyase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 84 | 369 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 84 | 369 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jta_A | 0.00000000000002 | 136 | 366 | 90 | 357 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jrg_B | 0.00000000000002 | 136 | 366 | 90 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1jrg_A | 0.00000000000002 | 136 | 366 | 90 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |