y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10429607g0020 |
Family | GH16 |
Protein Properties | Length: 272 Molecular Weight: 31212.9 Isoelectric Point: 4.92 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH16 | 38 | 210 | 3.1e-25 |
ILDNGQQLQLTLDRTSGCGIQSKQEYLFAKMDMQIKLIPGNSAGTVTTYYLSSQGSKHDEIDFEFLGNLSGDPYIMHTNVFAQGLGNREQQFYLWFDPTL DFHTYSVLWTSNQIIFSVDGTPVRVFKNRETELGNVDTNYHYPKSQAMRIYSTLWNADDWATRGGLVKTDWTK |
Full Sequence |
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Protein Sequence Length: 272 Download |
MYTPFLLLFL LFTSSAALVS ANFYSDFDIT WGDDRAKILD NGQQLQLTLD RTSGCGIQSK 60 QEYLFAKMDM QIKLIPGNSA GTVTTYYLSS QGSKHDEIDF EFLGNLSGDP YIMHTNVFAQ 120 GLGNREQQFY LWFDPTLDFH TYSVLWTSNQ IIFSVDGTPV RVFKNRETEL GNVDTNYHYP 180 KSQAMRIYST LWNADDWATR GGLVKTDWTK APFVASFRNF NATTFSSSES AAEETLDSNQ 240 QQRLQWVRKN YMIYDYCADT KRFPQGLPPE CK 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06955 | XET_C | 3.0e-20 | 236 | 271 | 36 | + Xyloglucan endo-transglycosylase (XET) C-terminus. This family represents the C-terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET). Xyloglucan is the predominant hemicellulose in the cell walls of most dicotyledons. With cellulose, it forms a network that strengthens the cell wall. XET catalyzes the splitting of xyloglucan chains and the linking of the newly generated reducing end to the non-reducing end of another xyloglucan chain, thereby loosening the cell wall. Note that all family members contain the pfam00722 domain. | ||
cd02183 | GH16_fungal_CRH1_transglycosylase | 4.0e-23 | 25 | 215 | 203 | + glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. | ||
pfam00722 | Glyco_hydro_16 | 3.0e-73 | 23 | 210 | 190 | + Glycosyl hydrolases family 16. | ||
PLN03161 | PLN03161 | 4.0e-105 | 22 | 271 | 267 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
cd02176 | GH16_XET | 1.0e-137 | 22 | 271 | 266 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK21552.1 | 0 | 1 | 272 | 3 | 273 | unknown [Picea sitchensis] |
GenBank | ABK22910.1 | 0 | 19 | 272 | 24 | 275 | unknown [Picea sitchensis] |
GenBank | ABR17157.1 | 0 | 70 | 272 | 1 | 202 | unknown [Picea sitchensis] |
DDBJ | BAD93484.1 | 0 | 19 | 271 | 20 | 272 | pollen major allergen No.121 isoform 1 [Cryptomeria japonica] |
RefSeq | XP_002274601.1 | 0 | 6 | 271 | 15 | 291 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1un1_B | 0 | 12 | 272 | 6 | 273 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
PDB | 1un1_A | 0 | 12 | 272 | 6 | 273 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
PDB | 1umz_B | 0 | 12 | 272 | 6 | 273 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 1umz_A | 0 | 12 | 272 | 6 | 273 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 2vh9_B | 0 | 6 | 271 | 12 | 290 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |