Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10429909g0020 |
Family | GT47 |
Protein Properties | Length: 195 Molecular Weight: 22527.8 Isoelectric Point: 8.7956 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 13 | 119 | 5.99994e-41 |
GFIRQELYALLKDEKEVHFTSGNTQRDGIRKATEGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVIDYTEFCIFVQSADAVKKGFL IRLLNSV |
Full Sequence |
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Protein Sequence Length: 195 Download |
MLIVHLVDVS QGGFIRQELY ALLKDEKEVH FTSGNTQRDG IRKATEGMRS SKFCLNIAGD 60 TPSSNRLFDA IASHCVPVII SDEIELPYED VIDYTEFCIF VQSADAVKKG FLIRLLNSVK 120 KEEWTRMWQK LKEVSHHFEY QYPSQPDDAV HMIWKAVARK LPSIRLSLHK GKRYSRSWLA 180 KQSDSFFSLQ NFVRG |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-27 | 15 | 119 | 105 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22716.1 | 0 | 11 | 184 | 16 | 189 | unknown [Glycine max] |
EMBL | CAN68950.1 | 0 | 12 | 182 | 305 | 475 | hypothetical protein [Vitis vinifera] |
EMBL | CBI31205.1 | 0 | 12 | 182 | 272 | 442 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ26762.1 | 0 | 12 | 176 | 179 | 343 | hypothetical protein OsJ_10674 [Oryza sativa Japonica Group] |
RefSeq | XP_002268382.1 | 0 | 12 | 182 | 305 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX420555 | 172 | 24 | 195 | 0 |
EX320391 | 171 | 25 | 195 | 0 |
BY878729 | 184 | 12 | 195 | 0 |
CO487304 | 139 | 57 | 195 | 0 |
JG591849 | 166 | 12 | 177 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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