Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10432967g0010 |
Family | AA3 |
Protein Properties | Length: 493 Molecular Weight: 53829.4 Isoelectric Point: 6.9112 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 21 | 489 | 0 |
ISEDGVFSSRARVLGGGSCLNAGFYTRASPEYVQDVGWDGKLVNESYPWVEQIVAHRPPVRQWQSAVRDALLDVGVIPYNGFTYDHIYGTKIGGTIFDDD GNRHTAADLLEYADPRKLTVLLHATVHRVLFTTKGVARPLAYGVVYTDKNGIKHNAYLKRVLGSEIIISAGALGSPQLLMLSGVGPAKHLAEMNIPVVLD LPAVGQGMADNPMNGIFVPSPNPVEVSLIEVVGITEFGSYIEAASGSDFGPEFPSRHYGMFSPEIGQLATVPPKQRTPEAISRAIENQKALPDAAFQGGF ILEKVMGPLSTGQLVLNTIDVEDNPSVTFNYFADPVDLQRCVLGMRTIEKIVESPRFSNFMYPDMSAGTLKNLTSSFPVNLLPKHTNDSSSLEQFCRDTV MTIWHYHGGCRVGSVVDRNYKVLGINALRIIDGSTFNNSPGTNPQATVMMLGRYMGVNILRDRGVKLVT |
Full Sequence |
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Protein Sequence Length: 493 Download |
MENFAKTLGD TSPSSPSQRF ISEDGVFSSR ARVLGGGSCL NAGFYTRASP EYVQDVGWDG 60 KLVNESYPWV EQIVAHRPPV RQWQSAVRDA LLDVGVIPYN GFTYDHIYGT KIGGTIFDDD 120 GNRHTAADLL EYADPRKLTV LLHATVHRVL FTTKGVARPL AYGVVYTDKN GIKHNAYLKR 180 VLGSEIIISA GALGSPQLLM LSGVGPAKHL AEMNIPVVLD LPAVGQGMAD NPMNGIFVPS 240 PNPVEVSLIE VVGITEFGSY IEAASGSDFG PEFPSRHYGM FSPEIGQLAT VPPKQRTPEA 300 ISRAIENQKA LPDAAFQGGF ILEKVMGPLS TGQLVLNTID VEDNPSVTFN YFADPVDLQR 360 CVLGMRTIEK IVESPRFSNF MYPDMSAGTL KNLTSSFPVN LLPKHTNDSS SLEQFCRDTV 420 MTIWHYHGGC RVGSVVDRNY KVLGINALRI IDGSTFNNSP GTNPQATVMM LGRYMGVNIL 480 RDRGVKLVTK TRR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 2.0e-23 | 120 | 230 | 115 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 5.0e-24 | 328 | 472 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
TIGR01810 | betA | 2.0e-25 | 30 | 472 | 487 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
COG2303 | BetA | 2.0e-30 | 29 | 484 | 504 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 1 | 483 | 484 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34759.1 | 0 | 1 | 483 | 89 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053612.1 | 0 | 1 | 483 | 91 | 580 | Os04g0573100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002282510.1 | 0 | 1 | 483 | 55 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298074.1 | 0 | 1 | 486 | 88 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509694.1 | 0 | 1 | 483 | 92 | 541 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 15 | 483 | 84 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 15 | 483 | 84 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 15 | 483 | 84 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 15 | 483 | 84 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 15 | 483 | 84 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE471602 | 307 | 97 | 403 | 0 |
HO796743 | 488 | 1 | 487 | 0 |
DV973296 | 291 | 97 | 387 | 0 |
GE471978 | 238 | 256 | 493 | 0 |
DV995199 | 238 | 256 | 493 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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