| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10433252g0010 |
| Family | PL1 |
| Protein Properties | Length: 212 Molecular Weight: 23383.6 Isoelectric Point: 8.0974 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 1 | 58 | 7.4e-22 |
| MQVTIAFNYFGEGLVQRMPRCRHGYFHVVNNHYAHWEMYAIGGSANPTINSEGNIFIA | |||
| Full Sequence |
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| Protein Sequence Length: 212 Download |
| MQVTIAFNYF GEGLVQRMPR CRHGYFHVVN NHYAHWEMYA IGGSANPTIN SEGNIFIAPD 60 NANAKQVTKR IYAVDEEQIQ WNWRSAGDQM LNGAYFITSG AVAADNYALA SSLGAKPALL 120 VETITGEAGA LQGRTQSTNG KTHMSVSAAP MSKLSASHSH QIIYFFLWTG CLTALNVVRF 180 SRVYGYVLVH EIVIGCGMLN PFLRNREMES AI |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 1.0e-7 | 3 | 56 | 56 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 5.0e-23 | 1 | 56 | 56 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 3.0e-26 | 1 | 60 | 60 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK66161.1 | 0 | 1 | 135 | 230 | 367 | pectate lyase [Fragaria x ananassa] |
| GenBank | ABK22323.1 | 0 | 90 | 212 | 1 | 124 | unknown [Picea sitchensis] |
| GenBank | ABR18471.1 | 0 | 1 | 186 | 303 | 488 | unknown [Picea sitchensis] |
| EMBL | CAB36835.1 | 0 | 1 | 134 | 236 | 369 | putative pectate lyase A11 (fragment) [Arabidopsis thaliana] |
| RefSeq | XP_002526952.1 | 0 | 1 | 137 | 258 | 394 | Pectate lyase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 1e-29 | 1 | 106 | 213 | 319 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 1e-29 | 1 | 106 | 213 | 319 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 0.002 | 2 | 58 | 183 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO208256 | 194 | 20 | 212 | 0 |
| DR521471 | 156 | 58 | 212 | 0 |
| DR503807 | 151 | 63 | 212 | 0 |
| DR100690 | 182 | 1 | 179 | 0 |
| ES259270 | 196 | 1 | 193 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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