| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10433901g0010 |
| Family | GH28 |
| Protein Properties | Length: 516 Molecular Weight: 55905.2 Isoelectric Point: 7.3909 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 130 | 472 | 0 |
| KAACRVESAVVEVPAEFCFLLNPISFIGPCQPNLVFQVTTFPLQTLNIDGTIVAPTNSRVWGSGLLQWIQFKKLQGITIQGNGLIDGRGTAWWGTSWDDQ LSRSKGNTAPKHSKPSKEMPSIKPTALRFYGSYNVTVQTITIQNSPQCHLKFDSCTTVTVSNITISSPGNSPNTDGVHLQNSHDVEIHHSTIGCGDDCVS MQTGCSDIRVHNINCGPGHGISIGALGKDKTKACVSNVTVYDIAIQDALNGVRIKTWQGGSGSVRDVSFSNIQVSNVEIPVVIDQFYCDNGRCPNQTSAV AISGVTYSEIRGTYAYKAVHLACSDNIPCTGISLSDIELQPVA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 516 Download |
| MQVDEDIDNI ARAVPLIVSK SLELFFLQDL CDRTYEMTLP RGAKTACCCG FSSKNSMALP 60 SKETALLMDG EQLGRKKPYP RKKKGSSSNS PPEAHNGSYY GDSNIFDVLS YGAKADGTTD 120 DSKAFLAAWK AACRVESAVV EVPAEFCFLL NPISFIGPCQ PNLVFQVTTF PLQTLNIDGT 180 IVAPTNSRVW GSGLLQWIQF KKLQGITIQG NGLIDGRGTA WWGTSWDDQL SRSKGNTAPK 240 HSKPSKEMPS IKPTALRFYG SYNVTVQTIT IQNSPQCHLK FDSCTTVTVS NITISSPGNS 300 PNTDGVHLQN SHDVEIHHST IGCGDDCVSM QTGCSDIRVH NINCGPGHGI SIGALGKDKT 360 KACVSNVTVY DIAIQDALNG VRIKTWQGGS GSVRDVSFSN IQVSNVEIPV VIDQFYCDNG 420 RCPNQTSAVA ISGVTYSEIR GTYAYKAVHL ACSDNIPCTG ISLSDIELQP VANVQYPLCW 480 NTYVKSESPT IPPVHCSHSG NSHHKPRPIL SNKDRC 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 2.0e-75 | 90 | 469 | 384 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN03003 | PLN03003 | 7.0e-76 | 103 | 473 | 377 | + Probable polygalacturonase At3g15720 | ||
| PLN03010 | PLN03010 | 9.0e-79 | 105 | 488 | 389 | + polygalacturonase | ||
| PLN02218 | PLN02218 | 4.0e-81 | 108 | 469 | 367 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 3.0e-97 | 105 | 500 | 402 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV24998.1 | 0 | 103 | 516 | 85 | 482 | polygalacturonase 1 [Oncidium Gower Ramsey] |
| GenBank | ABV24999.1 | 0 | 103 | 516 | 86 | 483 | polygalacturonase 2 [Oncidium Gower Ramsey] |
| GenBank | ABV25000.1 | 0 | 103 | 516 | 86 | 483 | polygalacturonase 3 [Oncidium Gower Ramsey] |
| GenBank | ABV25001.1 | 0 | 105 | 516 | 88 | 483 | polygalacturonase 4 [Oncidium Gower Ramsey] |
| RefSeq | XP_002266600.1 | 0 | 76 | 516 | 68 | 505 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 2e-23 | 180 | 416 | 104 | 314 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1nhc_F | 4e-21 | 193 | 468 | 54 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 4e-21 | 193 | 468 | 54 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_D | 4e-21 | 193 | 468 | 54 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_C | 4e-21 | 193 | 468 | 54 | 318 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES800057 | 362 | 144 | 487 | 0 |
| DR581859 | 269 | 249 | 516 | 0 |
| GO844129 | 347 | 113 | 458 | 0 |
| CO212200 | 258 | 260 | 516 | 0 |
| DV997082 | 285 | 88 | 371 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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