| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10437227g0010 |
| Family | PL1 |
| Protein Properties | Length: 223 Molecular Weight: 24678.7 Isoelectric Point: 7.0518 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 3 | 137 | 0 |
| RDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITISNSYFTHHNEVMLLGHSDSYTPDVNMRVTIAYNHFGEGLVQRMPRCRH GYFHVVNNDYTHWEMYAIGGSANPTINSEGNRFLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 223 Download |
| MVRDSPTHYG WRTICDGDGI SIFGGSHIWV DHVSLSNCAD GLIDAIMGST AITISNSYFT 60 HHNEVMLLGH SDSYTPDVNM RVTIAYNHFG EGLVQRMPRC RHGYFHVVNN DYTHWEMYAI 120 GGSANPTINS EGNRFLAAAN SFAKEVTKRV NEDVDEWKDW NWRSKGDMML NGAFFTPSGS 180 VASSTYLKAS SLAARPSTLV GPLTQNAGVL SCRKGVRCYP LNF |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 3.0e-24 | 18 | 135 | 130 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 1.0e-59 | 1 | 135 | 143 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 9.0e-63 | 2 | 138 | 146 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR17766.1 | 0 | 1 | 218 | 210 | 426 | unknown [Picea sitchensis] |
| GenBank | ABR17909.1 | 0 | 1 | 218 | 212 | 429 | unknown [Picea sitchensis] |
| GenBank | ACF84425.1 | 0 | 1 | 218 | 57 | 274 | unknown [Zea mays] |
| EMBL | CAB36835.1 | 0 | 1 | 218 | 157 | 374 | putative pectate lyase A11 (fragment) [Arabidopsis thaliana] |
| RefSeq | NP_567409.1 | 0 | 1 | 218 | 253 | 470 | pectate lyase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 16 | 211 | 149 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 16 | 211 | 149 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 5e-16 | 16 | 144 | 115 | 255 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1vbl_A | 0.0000000000002 | 18 | 112 | 190 | 301 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1pe9_B | 0.0000000000002 | 4 | 151 | 128 | 305 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DR117422 | 220 | 1 | 220 | 0 |
| DR097479 | 220 | 1 | 220 | 0 |
| GR953993 | 220 | 1 | 220 | 0 |
| DR097773 | 220 | 1 | 220 | 0 |
| GT258844 | 223 | 1 | 223 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |