Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10437227g0020 |
Family | PL1 |
Protein Properties | Length: 420 Molecular Weight: 45860.5 Isoelectric Point: 6.852 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 132 | 340 | 0 |
AVIQTEPLWIIFERDMVIQLKEELIMNSYKTIDGRGVNVHIANGPCITIQNVSHIIIHGIHVHDCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHIW VDHVSLSNCADGLIDAIMGSTAITISNSYFTHHNEVMLLGHSDSYTPDVNMQVTIAYNHFGEGLKQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN SQGNRFSAP |
Full Sequence |
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Protein Sequence Length: 420 Download |
MLLIGILCIH GGAAAKPFGS LLAENSREAE PASASATAAE NDPDSVVQMV QRSIDDSTRR 60 RELGYLSCGT GNPIDDCWRC DSDWENNRQR LADCGIGFGR TAVGGKNGSF YVVTDANDYD 120 AVNPRPGTLR HAVIQTEPLW IIFERDMVIQ LKEELIMNSY KTIDGRGVNV HIANGPCITI 180 QNVSHIIIHG IHVHDCKPAG NAMVRDSPTH YGWRTICDGD GISIFGGSHI WVDHVSLSNC 240 ADGLIDAIMG STAITISNSY FTHHNEVMLL GHSDSYTPDV NMQVTIAYNH FGEGLKQRMP 300 RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFSAP ADRLAKEVTK RINKDEAEWK 360 SWNWRSKGDM MLNGAYFTPS GAGASSAYLK ASSLAARPST LVGPLTQSAG VLSCRKGARC 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 4.0e-25 | 101 | 337 | 255 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 9.0e-66 | 152 | 337 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-73 | 146 | 340 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR17766.1 | 0 | 1 | 420 | 10 | 426 | unknown [Picea sitchensis] |
GenBank | ABR17909.1 | 0 | 1 | 420 | 10 | 429 | unknown [Picea sitchensis] |
DDBJ | BAI94495.1 | 0 | 35 | 420 | 22 | 407 | pectate lyase [Dianthus caryophyllus] |
RefSeq | NP_567409.1 | 0 | 20 | 420 | 67 | 470 | pectate lyase family protein [Arabidopsis thaliana] |
RefSeq | XP_002304700.1 | 0 | 20 | 420 | 54 | 452 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 72 | 413 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 72 | 413 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 2e-17 | 141 | 337 | 50 | 246 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 0.0000000000001 | 155 | 356 | 128 | 349 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1pe9_B | 0.0000000000004 | 162 | 386 | 90 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |