| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_106528g0010 |
| Family | GH28 |
| Protein Properties | Length: 132 Molecular Weight: 14496.3 Isoelectric Point: 6.4729 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 5 | 86 | 1e-21 |
| GSVRGVSFSNIQVSNVKIPIDIDQYYCERRTCKNQTSAVAISDVTYEKIRGTYMDTALHLACSDDVPCSDLKLIDIELRPVY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 132 Download |
| MAGVGSVRGV SFSNIQVSNV KIPIDIDQYY CERRTCKNQT SAVAISDVTY EKIRGTYMDT 60 ALHLACSDDV PCSDLKLIDI ELRPVYVSAR PFCWNSYGQS QAPLQPDTTV ACLRAGKPRN 120 DPGYAHSNTD AC 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 4.0e-11 | 12 | 83 | 74 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN02218 | PLN02218 | 4.0e-14 | 3 | 83 | 82 | + polygalacturonase ADPG | ||
| PLN02155 | PLN02155 | 1.0e-15 | 5 | 108 | 109 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 5.0e-18 | 2 | 82 | 82 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02793 | PLN02793 | 6.0e-24 | 3 | 112 | 113 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD62085.1 | 1e-37 | 2 | 118 | 221 | 338 | polygalacturonase precursor [Glycine max] |
| RefSeq | XP_002266099.1 | 6e-39 | 2 | 114 | 344 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312682.1 | 5e-38 | 2 | 114 | 332 | 448 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314612.1 | 9e-38 | 2 | 132 | 253 | 382 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002335797.1 | 9.99995e-41 | 2 | 130 | 37 | 168 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rmg_A | 0.0004 | 2 | 99 | 256 | 356 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO480795 | 131 | 2 | 132 | 0 |
| DV994598 | 132 | 1 | 132 | 0 |
| GE477751 | 132 | 1 | 132 | 0 |
| GW746185 | 82 | 52 | 132 | 0 |
| GW746185 | 51 | 2 | 52 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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