| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10862g0010 |
| Family | GH28 |
| Protein Properties | Length: 283 Molecular Weight: 30206 Isoelectric Point: 4.3099 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 136 | 283 | 4.4e-33 |
| QTACSMSNSVFLVPEGYRYLVKPITFTGPCNSSGSMIVQIAGTVVAPDDPTTWDPQNPRTWLAFSRLNGVTIQGGGVIDGSGQQCPADPLQLDLSFQNSQ QIHIVISRSIGVQVRNLLVVAPGDSPNTDGIHISHSQDVGIQGCKIAT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 283 Download |
| MAFRMVNNNN LTSSISIKFV LTFLVCISSL PGLARAVADC GNSNLNYCDA GEEEELTIGE 60 TRPGIANLRN QGLISAAVES RYPPALDSEL DILLRDKFLA KLTNNDGEIS VVNVESFGAQ 120 GDGTTDDTQA FMNAWQTACS MSNSVFLVPE GYRYLVKPIT FTGPCNSSGS MIVQIAGTVV 180 APDDPTTWDP QNPRTWLAFS RLNGVTIQGG GVIDGSGQQC PADPLQLDLS FQNSQQIHIV 240 ISRSIGVQVR NLLVVAPGDS PNTDGIHISH SQDVGIQGCK IAT 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02155 | PLN02155 | 5.0e-32 | 111 | 283 | 196 | + polygalacturonase | ||
| PLN02188 | PLN02188 | 3.0e-32 | 112 | 283 | 196 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN03010 | PLN03010 | 8.0e-35 | 113 | 283 | 181 | + polygalacturonase | ||
| PLN02218 | PLN02218 | 3.0e-39 | 110 | 283 | 201 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 4.0e-47 | 111 | 283 | 198 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK23977.1 | 0 | 99 | 283 | 45 | 253 | unknown [Picea sitchensis] |
| GenBank | ACN40008.1 | 0 | 99 | 283 | 45 | 253 | unknown [Picea sitchensis] |
| RefSeq | XP_002299032.1 | 0 | 76 | 283 | 29 | 256 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317091.1 | 0 | 86 | 283 | 10 | 227 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525360.1 | 0 | 86 | 283 | 39 | 256 | Polygalacturonase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3jur_D | 0.000003 | 112 | 216 | 28 | 136 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 0.000003 | 112 | 216 | 28 | 136 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 0.000003 | 112 | 216 | 28 | 136 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 0.000003 | 112 | 216 | 28 | 136 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| Signal Peptide | ||||
|---|---|---|---|---|
| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BX252155 | 198 | 110 | 283 | 0 |
| DT763022 | 209 | 99 | 283 | 0 |
| DR502769 | 210 | 99 | 283 | 0 |
| EX423070 | 210 | 99 | 283 | 0 |
| EX415702 | 210 | 99 | 283 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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