| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_11025g0010 |
| Family | GH28 |
| Protein Properties | Length: 283 Molecular Weight: 31588.8 Isoelectric Point: 5.5981 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 123 | 283 | 5.19999e-40 |
| DKGGAQLNVPSGRWVTGSFNLTSNITLYLGKDALILGSQDPNDWPLIEPLPSYGRGRERPGGRHTSLIHGENLENVVITGENGTIDGQGSMWWDMWFNKT LQHTRGHLVEFVNSENIVISNVTFLNSPFWNIHPVYCRNVVIKHVTILAPLDAPNTDGIDP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 283 Download |
| MMTTDSENQE PCSYDDGIQT VCKLKWISGA PRAFFLLLFT LLVVGLVQTK TGMTLPSWVN 60 QPEDLQDHGF FEAEEQSCSG FVRMNSRRKK IVSIEEFGGV GDGKTMNTRA FQKAIDYLKL 120 FADKGGAQLN VPSGRWVTGS FNLTSNITLY LGKDALILGS QDPNDWPLIE PLPSYGRGRE 180 RPGGRHTSLI HGENLENVVI TGENGTIDGQ GSMWWDMWFN KTLQHTRGHL VEFVNSENIV 240 ISNVTFLNSP FWNIHPVYCR NVVIKHVTIL APLDAPNTDG IDP 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00295 | Glyco_hydro_28 | 4.0e-13 | 190 | 283 | 95 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 2.0e-13 | 81 | 281 | 212 | + polygalacturonase ADPG | ||
| PLN03003 | PLN03003 | 9.0e-14 | 92 | 282 | 198 | + Probable polygalacturonase At3g15720 | ||
| PLN02188 | PLN02188 | 8.0e-15 | 91 | 281 | 201 | + polygalacturonase/glycoside hydrolase family protein | ||
| COG5434 | PGU1 | 1.0e-31 | 91 | 283 | 216 | + Endopygalactorunase [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ05322.1 | 0 | 72 | 283 | 58 | 271 | hypothetical protein OsI_27527 [Oryza sativa Indica Group] |
| GenBank | EAZ41253.1 | 0 | 72 | 283 | 58 | 271 | hypothetical protein OsJ_25761 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060796.1 | 0 | 72 | 283 | 58 | 271 | Os08g0107300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002310517.1 | 0 | 77 | 283 | 20 | 226 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002443718.1 | 0 | 74 | 283 | 76 | 286 | hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3jur_D | 1e-18 | 92 | 283 | 28 | 243 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 1e-18 | 92 | 283 | 28 | 243 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 1e-18 | 92 | 283 | 28 | 243 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 1e-18 | 92 | 283 | 28 | 243 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 2uvf_B | 0.000000000000004 | 86 | 238 | 151 | 298 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
