Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_13968g0020 |
Family | GT47 |
Protein Properties | Length: 448 Molecular Weight: 51665.6 Isoelectric Point: 6.7849 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 38 | 323 | 0 |
GWFATNQFAVDVIFRNRMKQYECLTSDSSMASAVYVPFYAGLDISRHLWGYNISVRDSASLQLMDWLVSRPEWEINKGHDHFLVGGRITWDFRRLTDSES DWGSKLLFLPAMKNMTMLVVEASPWNRNDMAIPYPTYFHPAKDSDIIEWQNRMRSMDRPSLFSFAGAPRPDIPTSIRGQIMDQCRTSKVGKLLECDLGES KCHSPSTIMNMFQESVFCLQPQGDSYTRRSFFDSMLAGCIPVLFHPGSAYAQYIWHLPKNYSTYSVFIPEDDIRKRNVSIEQRLLQ |
Full Sequence |
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Protein Sequence Length: 448 Download |
MMKECRRLSL WTNMCKFTSN AGLGPPLENT KGVFSNTGWF ATNQFAVDVI FRNRMKQYEC 60 LTSDSSMASA VYVPFYAGLD ISRHLWGYNI SVRDSASLQL MDWLVSRPEW EINKGHDHFL 120 VGGRITWDFR RLTDSESDWG SKLLFLPAMK NMTMLVVEAS PWNRNDMAIP YPTYFHPAKD 180 SDIIEWQNRM RSMDRPSLFS FAGAPRPDIP TSIRGQIMDQ CRTSKVGKLL ECDLGESKCH 240 SPSTIMNMFQ ESVFCLQPQG DSYTRRSFFD SMLAGCIPVL FHPGSAYAQY IWHLPKNYST 300 YSVFIPEDDI RKRNVSIEQR LLQIHPEQVK SMRDEVIKLI PALVYADPRS KLKNFKDAFD 360 VTVQSMIDKV TKLRSDILEG REIEDYREDE GSEQSARKWE GLRREGEQTW DEFFSKPKDE 420 QSGLPESNNA KQESVGIDQG KHQAERKA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-68 | 32 | 324 | 308 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 1 | 447 | 150 | 596 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 1 | 432 | 175 | 607 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAH19963.1 | 0 | 1 | 447 | 20 | 466 | AT2G20370 [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 447 | 169 | 615 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 1 | 419 | 142 | 560 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR953738 | 276 | 151 | 426 | 0 |
CF668912 | 281 | 96 | 376 | 0 |
JG636298 | 264 | 54 | 317 | 0 |
EL456596 | 268 | 30 | 297 | 0 |
EX333051 | 221 | 228 | 448 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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