Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_15634g0010 |
Family | AA3 |
Protein Properties | Length: 493 Molecular Weight: 53880.1 Isoelectric Point: 9.4933 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 31 | 491 | 0 |
AASRTYDYIVVGGGTAGCPLATTLSANYSVLVIERGGSPYGDPDIENADDFGILLGETNNYTSPAQTFISEDGVTLARARVLGGGTALNGGFYSRASSKY VRKMQWDEGLVKESYEWVEKQNAFEPDRLSHLLKSANPNNIVVLLNATVSRILFNSPTSQGKKGGSSGKPRARGVEFMDPHGQSYQVFLKESSRSSEVIV SAGSIGSPQLLLLSGIGPSEHLQDFNIPLVLHLPLVGQEIQDNPRATVTLQCSTPLEFSAIQVVGILKGSQTYIESSSFAQPASSINGSASPHPKNVYIG LIFQKLAFPLSRGELRLRSRDPRDNPSVRYNYYSHPLDLKRCVHGVRVMAKILKTRSLQRFTYAVANDSSHESRFIGQALPKNTKDYAAMVQFCRDTLKT MWHFHGGCHVGSVINQRYQVRGVESLRIVDGSTFRDGPGTNPQATTMMLGRYMGMKILQEL |
Full Sequence |
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Protein Sequence Length: 493 Download |
MSSKQHLSSS QAATTPSGVP FVFMTVDAER AASRTYDYIV VGGGTAGCPL ATTLSANYSV 60 LVIERGGSPY GDPDIENADD FGILLGETNN YTSPAQTFIS EDGVTLARAR VLGGGTALNG 120 GFYSRASSKY VRKMQWDEGL VKESYEWVEK QNAFEPDRLS HLLKSANPNN IVVLLNATVS 180 RILFNSPTSQ GKKGGSSGKP RARGVEFMDP HGQSYQVFLK ESSRSSEVIV SAGSIGSPQL 240 LLLSGIGPSE HLQDFNIPLV LHLPLVGQEI QDNPRATVTL QCSTPLEFSA IQVVGILKGS 300 QTYIESSSFA QPASSINGSA SPHPKNVYIG LIFQKLAFPL SRGELRLRSR DPRDNPSVRY 360 NYYSHPLDLK RCVHGVRVMA KILKTRSLQR FTYAVANDSS HESRFIGQAL PKNTKDYAAM 420 VQFCRDTLKT MWHFHGGCHV GSVINQRYQV RGVESLRIVD GSTFRDGPGT NPQATTMMLG 480 RYMGMKILQE LNK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 2.0e-11 | 32 | 125 | 100 | + choline dehydrogenase; Validated | ||
TIGR01810 | betA | 4.0e-36 | 201 | 480 | 317 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 2.0e-36 | 37 | 480 | 533 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PRK02106 | PRK02106 | 1.0e-38 | 170 | 488 | 361 | + choline dehydrogenase; Validated | ||
PLN02785 | PLN02785 | 4.0e-167 | 11 | 490 | 564 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22756.1 | 0 | 208 | 490 | 1 | 289 | unknown [Picea sitchensis] |
GenBank | ABK25456.1 | 0 | 1 | 490 | 21 | 555 | unknown [Picea sitchensis] |
EMBL | CBI34759.1 | 0 | 21 | 490 | 32 | 570 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275841.1 | 0 | 35 | 490 | 52 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 36 | 490 | 13 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 21 | 490 | 14 | 516 | A Chain A, Crystal Structure Of Acetyl-Coa DecarboxylaseSYNTHASE COMPLEX EPSILON Subunit 2 |
PDB | 3gdp_A | 0 | 21 | 490 | 14 | 516 | A Chain A, Crystal Structure Of Acetyl-Coa DecarboxylaseSYNTHASE COMPLEX EPSILON Subunit 2 |
PDB | 3gdn_B | 0 | 21 | 490 | 14 | 516 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 21 | 490 | 14 | 516 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 21 | 490 | 14 | 516 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE480478 | 319 | 175 | 493 | 0 |
DV974032 | 310 | 175 | 484 | 0 |
GO362815 | 299 | 166 | 459 | 0 |
GO364397 | 257 | 237 | 493 | 0 |
CO484031 | 289 | 22 | 264 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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