| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_158983g0080 |
| Family | GT51 |
| Protein Properties | Length: 711 Molecular Weight: 76844.2 Isoelectric Point: 9.6768 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT51 | 67 | 237 | 0 |
| GSRGIKHNDSIPLEDFPDNLIKATLATEDRRFYDHFGIDVAGTARALMTNAQAGGVRQGGSSITQQLAKNLFLNNERTIERKVKEAFLAIWLETRLTKNE ILKLYLDRAYMGGGTFGVDGAAHFYFNKSARDVNLAEAAMLAGLFKAPTKYAPHINLPAARARANVVLDNL | |||
| Full Sequence |
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| Protein Sequence Length: 711 Download |
| MDRFYVGRWK RWVFIEPLSE GATIGLAGLV LMLALAIPAF RETSDDDWLK KSDLAVTFLD 60 RYGNPIGSRG IKHNDSIPLE DFPDNLIKAT LATEDRRFYD HFGIDVAGTA RALMTNAQAG 120 GVRQGGSSIT QQLAKNLFLN NERTIERKVK EAFLAIWLET RLTKNEILKL YLDRAYMGGG 180 TFGVDGAAHF YFNKSARDVN LAEAAMLAGL FKAPTKYAPH INLPAARARA NVVLDNLVDA 240 GFMTEGQVFG ARRNPANAVD RRDENSPNYY LDYAFDEMRK LVLTFPKSYI ERVFVVRTAI 300 DMNVQHAAEA AVENQLRQFG RDYHATQAAV VLADLDGGVR AMVGGRDYGA SQFNRAVDAM 360 RQPGSSFKPY VYTTALMNGF TPKSIVVDGP VCIGNWCPQN YGRSYSGSVT LTQAITRSIN 420 VVPVKLSIAM GGKGGPRAGR AKIVETARKM GITAPLVDTP SLPIGSTEVS VVEHAVAYAT 480 FPNKGRAVKP HAVLEVRTGA GDPVWRWDRD GRKPTQAIPA SVAADMAEMM SHVVDEGTAR 540 RAQLDGIPAA GKTGTTNAFR DAWFVGYTGN FTAAVWYGND DYSSTNRMTG GSLPAQTWHD 600 VMVVAHQGVE IKDIPGIGAG KKRPDAVASA NANAKASEVN PGPPPVLTRR GANILVRVEK 660 LFDDAAKTVA VPGKTSSNDN GKPAPASSVA FPDSFASATD QPAAAQPPRK N 720 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00912 | Transgly | 3.0e-80 | 63 | 238 | 176 | + Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerisation of murein glycan chains. | ||
| COG4953 | PbpC | 7.0e-81 | 53 | 608 | 566 | + Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane] | ||
| TIGR02071 | PBP_1b | 8.0e-104 | 77 | 602 | 549 | + penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| TIGR02074 | PBP_1a_fam | 0 | 77 | 608 | 541 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG0744 | MrcB | 0 | 51 | 619 | 579 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001204768.1 | 0 | 1 | 711 | 46 | 759 | putative penicillin-binding protein (mrcA-like) [Bradyrhizobium sp. ORS278] |
| RefSeq | YP_001239081.1 | 0 | 1 | 711 | 46 | 759 | putative penicillin-binding protein [Bradyrhizobium sp. BTAi1] |
| RefSeq | YP_487112.1 | 0 | 1 | 711 | 61 | 769 | penicillin-binding protein 1A [Rhodopseudomonas palustris HaA2] |
| RefSeq | YP_531665.1 | 0 | 1 | 711 | 46 | 757 | penicillin-binding protein 1A [Rhodopseudomonas palustris BisB18] |
| RefSeq | YP_780808.1 | 0 | 1 | 711 | 46 | 752 | 1A family penicillin-binding protein [Rhodopseudomonas palustris BisA53] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3zga_B | 0 | 158 | 589 | 3 | 442 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3zg8_B | 0 | 158 | 589 | 3 | 442 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3zg7_B | 0 | 158 | 589 | 3 | 442 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3fwl_A | 0 | 77 | 592 | 163 | 684 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| PDB | 3vma_A | 0 | 77 | 592 | 180 | 701 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| Transmembrane Domains | ||||
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| Start | End | |||
| 12 | 34 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JK727499 | 185 | 63 | 247 | 6.02558e-44 |
| HO417631 | 220 | 405 | 613 | 1e-36 |
| HO417631 | 117 | 296 | 407 | 1e-36 |
| DT742315 | 155 | 80 | 234 | 5e-35 |
| DT557994 | 187 | 80 | 266 | 6e-34 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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