| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_159087g0070 |
| Family | GT51 |
| Protein Properties | Length: 759 Molecular Weight: 81936.1 Isoelectric Point: 10.2447 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT51 | 139 | 313 | 0 |
| GSVIATRGEMPGANVSLKDLPPYLPKAFIAIEDRRFYSHFGIDPTGIIRAAVTNLLHRGVSQGGSTLSQQLAKNLFLTQERTMQRKLQEVELALWLERKY SKNEILELYLNRVYFGSGAYGVEAAAQKYFGKSAKNVSLSEAAMLAGLVKSPSRLAPNRNPDGAEKRAQIVLSAM | |||
| Full Sequence |
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| Protein Sequence Length: 759 Download |
| MALGRKKQGG RKEPKFDGAA SLDSVRLNPR DRIGGRDDDD APPKRRAAKS RPLDDDEDDM 60 PRERLRKTRA AERKESKSKA RGRSRSGLGR LVYWGAVLGL WAIIAGAGVI IWVGAHLPAI 120 QSLEIPKRPP TIQITGMDGS VIATRGEMPG ANVSLKDLPP YLPKAFIAIE DRRFYSHFGI 180 DPTGIIRAAV TNLLHRGVSQ GGSTLSQQLA KNLFLTQERT MQRKLQEVEL ALWLERKYSK 240 NEILELYLNR VYFGSGAYGV EAAAQKYFGK SAKNVSLSEA AMLAGLVKSP SRLAPNRNPD 300 GAEKRAQIVL SAMADTNFIT EAQAKAAIEK PSYAVKPVGA GTINYVADWI GEVLDDLVGQ 360 IDQNIVVETS IDPKLQSVAE AAIIDELATK SVKFNVTQGA LVAMTPSGAV RAMVGGRNYA 420 ESQFNRAVTA KRQPGSAFKP FVYLTAVEGG MTPDTVRQDA PLDVKGWRPE NYSREYFGPV 480 TLTQALSMSL NTVAVRLGLE VGPANVVRTA HRLGIASKLE PNATISLGTS EVSLNELVGA 540 YAPFANGGFS ASPHVVNRIR TPEGKVLYAR RNDAPTRVID ANAVGMMNVM MHETLVTGTA 600 KKADIPGWSA AGKTGTSQDF RDAWFIGYTA NLVTGIWLGN DDNSPTRKAT GGGLPVEVWT 660 RFMRAAHQNI APAPLPGSTQ SPGGFLSNLF PGNSRAPARE PNPAQPYPQS SNNQDYPNTP 720 AAYPPQQQTR PPVTQTSARP EAAAGLDGWL IDRVFGGRR |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02073 | PBP_1c | 1.0e-96 | 153 | 697 | 556 | + penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG4953 | PbpC | 4.0e-97 | 153 | 682 | 543 | + Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane] | ||
| TIGR02071 | PBP_1b | 3.0e-126 | 153 | 675 | 549 | + penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| TIGR02074 | PBP_1a_fam | 0 | 152 | 669 | 530 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG0744 | MrcB | 0 | 117 | 713 | 610 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_767550.1 | 0 | 1 | 759 | 1 | 737 | penicillin-binding protein [Bradyrhizobium japonicum USDA 110] |
| RefSeq | YP_001243404.1 | 0 | 1 | 759 | 1 | 734 | putative penicillin-binding protein pbpC/mrcB-like protein [Bradyrhizobium sp. BTAi1] |
| RefSeq | YP_002287146.1 | 0 | 3 | 756 | 1 | 752 | penicillin-binding protein 1A [Oligotropha carboxidovorans OM5] |
| RefSeq | YP_483664.1 | 0 | 1 | 756 | 1 | 734 | penicillin-binding protein 1A [Rhodopseudomonas palustris HaA2] |
| RefSeq | YP_575587.1 | 0 | 13 | 758 | 14 | 732 | penicillin-binding protein 1A [Nitrobacter hamburgensis X14] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3fwl_A | 0 | 158 | 675 | 168 | 702 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| PDB | 3vma_A | 0 | 158 | 675 | 185 | 719 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| PDB | 3zga_B | 0 | 234 | 641 | 3 | 433 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| PDB | 3zg8_B | 0 | 234 | 641 | 3 | 433 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| PDB | 3zg7_B | 0 | 234 | 641 | 3 | 433 | A Chain A, Crystal Structure Of The Full-Length Transglycosylase Pbp1b From Escherichia Coli |
| Transmembrane Domains | ||||
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| Start | End | |||
| 91 | 113 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JK727499 | 208 | 116 | 323 | 0 |
| HO417631 | 199 | 476 | 667 | 0 |
| HO417631 | 136 | 349 | 472 | 0 |
| DT557994 | 179 | 156 | 334 | 1e-37 |
| DT742315 | 146 | 156 | 301 | 7e-33 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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