y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159118g0680 |
Family | GT4 |
Protein Properties | Length: 359 Molecular Weight: 38643.4 Isoelectric Point: 8.6204 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 186 | 326 | 3.7e-40 |
QRPPVVLGVGRLNPEKNFAALVQAIPHLPPDARVVIFGEGPERDNLLVLAKQLGVVDRLELPGYRDDPWPCYAQARCFALTSRREAFGNVVVEALASGLP VVSTRSGGPDEILEHGRVGSLVDSGDIDVLARAINQALANP |
Full Sequence |
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Protein Sequence Length: 359 Download |
MVIQSKHVAV YVPALNRGGA ERVAALLASG FFKAGWRTSL LVDFEASENR ALIDAGVSIC 60 VLGSSHARSI LTLTGFLRSQ KPDVVLAIGG AANVKLSVAR LLAGGQSRIV LSYHGRSDVG 120 RGRLGHMSYS FAPWLARQAD AVVCVSDGLL EHLRDDWKAP PDKLTRIYNP VSVEHAIPAS 180 HSDILQRPPV VLGVGRLNPE KNFAALVQAI PHLPPDARVV IFGEGPERDN LLVLAKQLGV 240 VDRLELPGYR DDPWPCYAQA RCFALTSRRE AFGNVVVEAL ASGLPVVSTR SGGPDEILEH 300 GRVGSLVDSG DIDVLARAIN QALANPGDPE PRIARARMFD AETAIRSYLG LFNTILIRQ 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03807 | GT1_WbnK_like | 2.0e-46 | 7 | 353 | 369 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
cd03798 | GT1_wlbH_like | 6.0e-51 | 7 | 355 | 363 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 4.0e-58 | 18 | 353 | 365 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
TIGR00072 | hydrog_prot | 3.0e-60 | 7 | 338 | 344 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
cd03811 | GT1_WabH_like | 1.0e-81 | 7 | 349 | 356 | + This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_842271.1 | 0 | 7 | 355 | 2 | 365 | glycosyl transferase group 1 [Nitrosomonas europaea ATCC 19718] |
RefSeq | YP_001925275.1 | 0 | 10 | 358 | 1 | 347 | glycosyl transferase group 1 [Methylobacterium populi BJ001] |
RefSeq | YP_002246793.1 | 0 | 8 | 356 | 9 | 369 | glycosyl transferases group 1 [Coprothermobacter proteolyticus DSM 5265] |
RefSeq | YP_002246794.1 | 0 | 7 | 355 | 15 | 375 | glycosyl transferase, group 1 family protein [Coprothermobacter proteolyticus DSM 5265] |
RefSeq | YP_748302.1 | 0 | 7 | 352 | 2 | 362 | glycosyl transferase, group 1 [Nitrosomonas eutropha C91] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 2e-18 | 98 | 356 | 117 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 2e-18 | 98 | 356 | 117 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 2e-18 | 98 | 356 | 117 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 2e-18 | 98 | 356 | 117 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 2e-18 | 98 | 356 | 117 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE254794 | 139 | 189 | 326 | 0.000000000000002 |
DV711665 | 252 | 81 | 313 | 0.000000000000002 |
FL735851 | 264 | 81 | 325 | 0.000000000000005 |
FE482192 | 121 | 194 | 313 | 0.000000000000009 |
FE505314 | 121 | 194 | 313 | 0.00000000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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