y
Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_159118g0690 |
Family | GT4 |
Protein Properties | Length: 361 Molecular Weight: 39447.5 Isoelectric Point: 8.6393 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 183 | 326 | 1.3e-33 |
MEILFSGLLSENKGMHVLIPALARLRQTTENWHCTVAGNGDVQHFVDMAHKAGLDQKMTFTGWIEASEMLDHMRKADVVVLPSRTEALPLSLIEGACAGA ALVATDVGNVRDIVEDGVNGLLVAREPEPIASALLEIAANRSSL |
Full Sequence |
---|
Protein Sequence Length: 361 Download |
MSSVRVLCVT PFGPSGKGGI DRLYHYFREF IAEQNEPGID LRFAQSRGDA RGILWIATFP 60 LILAKIGFAL SRFRPHVVHI NFATGGSLPR KYAILKIARA FGARTIVHFH GQFIEDQVAA 120 RTVPGRLFSA IANQADCVVA LGKVHADAFE RIGVQPQRIV IVPNGIPDFA ADLPLPKQDT 180 GSMEILFSGL LSENKGMHVL IPALARLRQT TENWHCTVAG NGDVQHFVDM AHKAGLDQKM 240 TFTGWIEASE MLDHMRKADV VVLPSRTEAL PLSLIEGACA GAALVATDVG NVRDIVEDGV 300 NGLLVAREPE PIASALLEIA ANRSSLGEMQ SASRQIYQRH FTLSAFAQRL RELYRQVAKA 360 P 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03799 | GT1_amsK_like | 4.0e-38 | 66 | 350 | 296 | + This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. | ||
cd03808 | GT1_cap1E_like | 2.0e-40 | 6 | 352 | 360 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
COG0438 | RfaG | 3.0e-44 | 5 | 359 | 381 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03798 | GT1_wlbH_like | 6.0e-51 | 4 | 357 | 365 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 3.0e-58 | 5 | 355 | 382 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_772946.1 | 1e-35 | 2 | 359 | 11 | 365 | glycosyl transferase [Bradyrhizobium japonicum USDA 110] |
RefSeq | YP_003450770.1 | 4e-35 | 45 | 360 | 59 | 378 | hypothetical protein AZL_a06950 [Azospirillum sp. B510] |
RefSeq | YP_003450771.1 | 5e-35 | 6 | 360 | 74 | 434 | hypothetical protein AZL_a06960 [Azospirillum sp. B510] |
RefSeq | ZP_01017219.1 | 3e-38 | 1 | 359 | 15 | 376 | probable glycosyl transferase [Parvularcula bermudensis HTCC2503] |
RefSeq | ZP_05886013.1 | 4e-32 | 15 | 357 | 21 | 362 | polysaccharide biosynthesis protein putative [Vibrio coralliilyticus ATCC BAA-450] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2gek_A | 0.000000004 | 160 | 360 | 184 | 386 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2gej_A | 0.000000004 | 160 | 360 | 184 | 386 | A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man |
PDB | 3c48_B | 0.00000001 | 185 | 354 | 246 | 422 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c48_A | 0.00000001 | 185 | 354 | 246 | 422 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c4v_B | 0.00000001 | 185 | 354 | 226 | 402 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |