Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159131g0220 |
Family | GT51 |
Protein Properties | Length: 241 Molecular Weight: 26020.8 Isoelectric Point: 8.8594 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT51 | 62 | 212 | 0 |
TVTRKWVDLDEMSEALPRSVVAAEDAKFCFHHGIDWDSVRNIIEDAQDGEVARGGSTITQQVAKNLFLWPGRSVVRKALEFPLAMWIDLVLSKKRILELY LNMAELGPDGQFGAEAGANYAFGRPAAALSAREAALLASILPNPVTRSARN |
Full Sequence |
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Protein Sequence Length: 241 Download |
MAAPASIPQS LAWPGIGKNK KAWFLLVGVA GRPPPDTRCD AKIDPHGFAG GTGAGAFALR 60 ETVTRKWVDL DEMSEALPRS VVAAEDAKFC FHHGIDWDSV RNIIEDAQDG EVARGGSTIT 120 QQVAKNLFLW PGRSVVRKAL EFPLAMWIDL VLSKKRILEL YLNMAELGPD GQFGAEAGAN 180 YAFGRPAAAL SAREAALLAS ILPNPVTRSA RNPGPGVRRM AGTYVVRAQS AEISDCWERN 240 R |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02074 | PBP_1a_fam | 3.0e-35 | 65 | 186 | 123 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
pfam00912 | Transgly | 3.0e-49 | 65 | 220 | 158 | + Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerisation of murein glycan chains. | ||
COG0744 | MrcB | 8.0e-50 | 65 | 221 | 159 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
TIGR02070 | mono_pep_trsgly | 3.0e-50 | 65 | 221 | 158 | + monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by Pfam model pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan) [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
PRK00056 | mtgA | 7.0e-83 | 63 | 241 | 180 | + monofunctional biosynthetic peptidoglycan transglycosylase; Provisional |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_945878.1 | 0 | 63 | 241 | 56 | 234 | monofunctional biosynthetic peptidoglycan transglycosylase [Rhodopseudomonas palustris CGA009] |
RefSeq | YP_484137.1 | 0 | 62 | 240 | 45 | 224 | monofunctional biosynthetic peptidoglycan transglycosylase [Rhodopseudomonas palustris HaA2] |
RefSeq | YP_530392.1 | 0 | 63 | 237 | 45 | 219 | monofunctional biosynthetic peptidoglycan transglycosylase [Rhodopseudomonas palustris BisB18] |
RefSeq | YP_567451.1 | 0 | 62 | 240 | 45 | 223 | monofunctional biosynthetic peptidoglycan transglycosylase [Rhodopseudomonas palustris BisB5] |
RefSeq | YP_575972.1 | 0 | 62 | 241 | 45 | 224 | monofunctional biosynthetic peptidoglycan transglycosylase [Nitrobacter hamburgensis X14] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3nb6_A | 2e-23 | 65 | 194 | 20 | 149 | A Chain A, Crystal Structure Of Aquifex Aeolicus Peptidoglycan Glycosyltransferase In Complex With Methylphosphoryl Neryl Moenomycin |
PDB | 3nb7_A | 6e-23 | 65 | 194 | 20 | 149 | A Chain A, Crystal Structure Of Aquifex Aeolicus Peptidoglycan Glycosyltransferase In Complex With Methylphosphoryl Neryl Moenomycin |
PDB | 3d3h_A | 6e-23 | 65 | 194 | 20 | 149 | A Chain A, Crystal Structure Of Aquifex Aeolicus Peptidoglycan Glycosyltransferase In Complex With Methylphosphoryl Neryl Moenomycin |
PDB | 2oqo_A | 6e-23 | 65 | 194 | 20 | 149 | A Chain A, Crystal Structure Of A Peptidoglycan Glycosyltransferase From A Class A Pbp: Insight Into Bacterial Cell Wall Synthesis |
PDB | 3vmt_B | 8e-19 | 67 | 223 | 76 | 238 | A Chain A, Crystal Structure Of A Peptidoglycan Glycosyltransferase From A Class A Pbp: Insight Into Bacterial Cell Wall Synthesis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW459098 | 171 | 63 | 233 | 1e-27 |
GT654581 | 171 | 63 | 233 | 1e-27 |
GW433737 | 171 | 63 | 233 | 1e-27 |
HS072133 | 171 | 63 | 233 | 1e-27 |
GW439025 | 171 | 63 | 233 | 1e-27 |
Sequence Alignments (This image is cropped. Click for full image.) |
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