| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_159137g0010 |
| Family | GT51 |
| Protein Properties | Length: 614 Molecular Weight: 66655.9 Isoelectric Point: 10.3016 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT51 | 49 | 216 | 0 |
| GRWRLPAHAKDVDPGYLNLLLSYEDKRFRSHIGVDPLAMGRAAAQLVTRGHIVSGGSTITMQVARLMEPRQERSVTAKLRQMVRAIQLERTLSKDEILDL YLTLAPFGGNLEGVRAASFAYLGKEPKRLSLAESALLVALPQSPETRRLDRHPEVAQAARDRVLARMV | |||
| Full Sequence |
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| Protein Sequence Length: 614 Download |
| MAVFAFLVIA AAIWIASLPP LPFTDAKKVS TTILDRNGKL LRAFAMADGR WRLPAHAKDV 60 DPGYLNLLLS YEDKRFRSHI GVDPLAMGRA AAQLVTRGHI VSGGSTITMQ VARLMEPRQE 120 RSVTAKLRQM VRAIQLERTL SKDEILDLYL TLAPFGGNLE GVRAASFAYL GKEPKRLSLA 180 ESALLVALPQ SPETRRLDRH PEVAQAARDR VLARMVEDGR VSADDAAHAK REIVPRLRKP 240 MPLLAPHATD QSLAIMKDTP VIQLTLDSTI QKALESLARD RAIALGPDVS VGILAVDNES 300 GDVLAHVGSS DYFDTRRAGQ VDMTRAVRSP GSTLKPFIYG LAFEDGFVHP ESLIEDRPIR 360 YGSYAPENFD MTFQGTVTVR KALQMSLNVP AIALLDRIGS NRLTARIKQA GANLILPKDE 420 TPGLAMGLGG VGVTLNDLVR LYSGFPRLGE TTALREIVRP DDAAEPETRR LLDPSAAWLV 480 GNVLMGTPPP DNAPHNRLAF KTGTSYGYRD AWSVGFDGRM TIGIWVGRPD GAPVPGLTGR 540 TAAAPILFDA FARTGKLPMA LPKAPKGTLM ASNAKLPLPL RRFRPSGDFV RTGSEQALRI 600 QFPLNGSRID AYGG |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0744 | MrcB | 2.0e-98 | 28 | 575 | 581 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| TIGR02074 | PBP_1a_fam | 8.0e-102 | 52 | 546 | 531 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| PRK11240 | PRK11240 | 1.0e-163 | 20 | 547 | 532 | + penicillin-binding protein 1C; Provisional | ||
| TIGR02073 | PBP_1c | 0 | 20 | 594 | 590 | + penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG4953 | PbpC | 0 | 18 | 558 | 549 | + Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001239892.1 | 0 | 20 | 610 | 79 | 675 | penicillin-binding protein 1C (PBP-1C) [Bradyrhizobium sp. BTAi1] |
| RefSeq | YP_001991808.1 | 0 | 25 | 611 | 27 | 613 | penicillin-binding protein 1C [Rhodopseudomonas palustris TIE-1] |
| RefSeq | YP_486531.1 | 0 | 25 | 611 | 78 | 664 | penicillin-binding protein 1C [Rhodopseudomonas palustris HaA2] |
| RefSeq | YP_577334.1 | 0 | 26 | 614 | 52 | 640 | penicillin-binding protein 1C [Nitrobacter hamburgensis X14] |
| RefSeq | YP_781640.1 | 0 | 8 | 610 | 61 | 662 | penicillin-binding protein 1C [Rhodopseudomonas palustris BisA53] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2olv_B | 7e-37 | 23 | 527 | 6 | 565 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2olv_A | 7e-37 | 23 | 527 | 6 | 565 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2olu_A | 7e-37 | 23 | 527 | 6 | 565 | A Chain A, Structural Insight Into The Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme |
| PDB | 3dwk_D | 8e-37 | 33 | 527 | 10 | 556 | A Chain A, Identification Of Dynamic Structural Motifs Involved In Peptidoglycan Glycosyltransfer |
| PDB | 3dwk_C | 8e-37 | 33 | 527 | 10 | 556 | A Chain A, Identification Of Dynamic Structural Motifs Involved In Peptidoglycan Glycosyltransfer |
| Transmembrane Domains | ||||
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| Start | End | |||
| 2 | 24 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT557994 | 213 | 39 | 240 | 5e-22 |
| JK727499 | 205 | 28 | 232 | 9e-21 |
| FS401214 | 93 | 52 | 144 | 2e-18 |
| AW734717 | 215 | 121 | 330 | 3e-17 |
| BW690363 | 133 | 50 | 173 | 3e-17 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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