Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159155g0150 |
Family | AA3 |
Protein Properties | Length: 512 Molecular Weight: 56575.4 Isoelectric Point: 10.1292 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 7 | 509 | 0 |
GDFDYIVVGAGTAGCIVANRLSADPRKRVLVLEAGGRDNWIWFHIPVGYLFAIGNPRSDWMFKTEPEAGLNGRALAYPRGKVIGGSSAINAMISMRGQAA DYDHWRQLGLTGWGWDDVFPAFKKLEDHFLGESEHHGVGGGWRIEAPRLSWKVLDAVADAAHEMGIRKTPDFNTGDNEGIGYFHVNQKRGRRWSSARGFL KPALSRPNLRLETNVLVDRVIVENGRAVGVRFRQGGETIEARTRGEVILCSGSVGSTQVLHRSGIGPKEWLSPLGIDTVLDRPGVGRNLQDHLQQRAIYK VEGVRTLNETYYNLFRRGWMGVDYLLRRRGPLTMAPSQLGIFTRSDARQERANIQFHVQPLSLDKFGEPLHRFPAITIAACNLRPTSRGTIRIKSDAPDQ APAIAPNYLSTPEDRQVAADAIRVTRRLMKQHALAAYHPQEYLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAKMGTSSDPLAVVDERLRLYGLKGLRVI DAS |
Full Sequence |
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Protein Sequence Length: 512 Download |
MAKRLEGDFD YIVVGAGTAG CIVANRLSAD PRKRVLVLEA GGRDNWIWFH IPVGYLFAIG 60 NPRSDWMFKT EPEAGLNGRA LAYPRGKVIG GSSAINAMIS MRGQAADYDH WRQLGLTGWG 120 WDDVFPAFKK LEDHFLGESE HHGVGGGWRI EAPRLSWKVL DAVADAAHEM GIRKTPDFNT 180 GDNEGIGYFH VNQKRGRRWS SARGFLKPAL SRPNLRLETN VLVDRVIVEN GRAVGVRFRQ 240 GGETIEARTR GEVILCSGSV GSTQVLHRSG IGPKEWLSPL GIDTVLDRPG VGRNLQDHLQ 300 QRAIYKVEGV RTLNETYYNL FRRGWMGVDY LLRRRGPLTM APSQLGIFTR SDARQERANI 360 QFHVQPLSLD KFGEPLHRFP AITIAACNLR PTSRGTIRIK SDAPDQAPAI APNYLSTPED 420 RQVAADAIRV TRRLMKQHAL AAYHPQEYLP GPSVGDDDAS LAKAAGDIGT TIFHPVGTAK 480 MGTSSDPLAV VDERLRLYGL KGLRVIDASA RR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00732 | GMC_oxred_N | 1.0e-45 | 77 | 299 | 231 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
TIGR03970 | Rv0697 | 9.0e-69 | 10 | 509 | 510 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
TIGR01810 | betA | 3.0e-131 | 10 | 509 | 503 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
COG2303 | BetA | 7.0e-165 | 4 | 510 | 516 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PRK02106 | PRK02106 | 1.0e-177 | 9 | 510 | 511 | + choline dehydrogenase; Validated |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_769660.1 | 0 | 1 | 509 | 1 | 509 | GMC type oxidoreductase [Bradyrhizobium japonicum USDA 110] |
RefSeq | NP_949067.1 | 0 | 1 | 509 | 1 | 509 | GMC-type oxidoreductase [Rhodopseudomonas palustris CGA009] |
RefSeq | YP_001418131.1 | 0 | 2 | 509 | 9 | 516 | glucose-methanol-choline oxidoreductase [Xanthobacter autotrophicus Py2] |
RefSeq | YP_001993222.1 | 0 | 1 | 509 | 1 | 509 | glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris TIE-1] |
RefSeq | ZP_06359092.1 | 0 | 1 | 509 | 1 | 509 | glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris DX-1] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3fim_B | 0 | 7 | 509 | 1 | 537 | B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus Eryingii |
PDB | 3t37_A | 0 | 8 | 509 | 17 | 495 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
PDB | 3nne_H | 0 | 8 | 509 | 13 | 501 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_G | 0 | 8 | 509 | 13 | 501 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_F | 0 | 8 | 509 | 13 | 501 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HS071991 | 195 | 220 | 414 | 0 |
GT686387 | 173 | 337 | 509 | 0 |
HO408029 | 425 | 122 | 509 | 0 |
GT692120 | 231 | 259 | 489 | 0 |
GW427340 | 210 | 280 | 489 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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