Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159244g0020 |
Family | GH19 |
Protein Properties | Length: 347 Molecular Weight: 36028.9 Isoelectric Point: 7.5124 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 147 | 347 | 0 |
TKISQDFFNSLASGAGSSCMGKGFYTYSAFIAAANAYSGFGTTGSNDDQKRELAAFFANVMHETGGLCYINEINPSSNYCQSSSTWPCTSGKSYHGRGPL QISWNYNYGAAGQSIGFDGLNNPEKVGQDATISFKTAVWFWMKNSNCHSAITSGQGFGRTIKAINSGECSAGSSDQVTSRVNYYIKFCSQLEVDPGTNLS C |
Full Sequence |
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Protein Sequence Length: 347 Download |
MASSSGRSVI AGLHGRVVVT MSLVLQLVVG VSVNVVNAQN CGCSSELCCS KWGYCGSTTA 60 YCSDGCQSGP CNNSGGESVA NIVSRSFFDG LLKNPSLPNC GCASGLCCSK WGYCGTTSAY 120 CGNDCQSGPC YNSGGGSRSG GGGNVGTKIS QDFFNSLASG AGSSCMGKGF YTYSAFIAAA 180 NAYSGFGTTG SNDDQKRELA AFFANVMHET GGLCYINEIN PSSNYCQSSS TWPCTSGKSY 240 HGRGPLQISW NYNYGAAGQS IGFDGLNNPE KVGQDATISF KTAVWFWMKN SNCHSAITSG 300 QGFGRTIKAI NSGECSAGSS DQVTSRVNYY IKFCSQLEVD PGTNLSC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06921 | ChtBD1_GH19_hevein | 4.0e-5 | 102 | 127 | 26 | + Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains. This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. | ||
cd00442 | lysozyme_like | 1.0e-5 | 233 | 288 | 56 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
COG3179 | COG3179 | 5.0e-8 | 174 | 313 | 174 | + Predicted chitinase [General function prediction only] | ||
pfam00182 | Glyco_hydro_19 | 1.0e-81 | 149 | 347 | 231 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 4.0e-94 | 149 | 347 | 230 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22417.1 | 0.000000003 | 1 | 91 | 1 | 94 | unknown [Picea sitchensis] |
GenBank | ABK22417.1 | 0 | 99 | 347 | 38 | 284 | unknown [Picea sitchensis] |
GenBank | ABK23018.1 | 0.00000001 | 1 | 91 | 1 | 94 | unknown [Picea sitchensis] |
GenBank | ABK23018.1 | 0 | 99 | 347 | 38 | 284 | unknown [Picea sitchensis] |
GenBank | ABK23737.1 | 0 | 99 | 347 | 38 | 284 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hbh_A | 0 | 145 | 347 | 2 | 204 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3hbe_X | 0 | 145 | 347 | 2 | 204 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3hbd_A | 0 | 145 | 347 | 2 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3iwr_B | 0 | 98 | 347 | 14 | 292 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3iwr_B | 0.00005 | 43 | 92 | 13 | 71 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |