Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_170598g0010 |
Family | GH19 |
Protein Properties | Length: 228 Molecular Weight: 24636.1 Isoelectric Point: 4.3554 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 11 | 218 | 0 |
VGDIATQDFFNGILSAASDGCAGKTFYTYIDFINAANSFSSFGTTGTSDDNKEKLLLSSPTLLTRQGVYLCYVEEIAKSEYCDSSNTQYPCASGQQYYGR GPLQLTGNANYGAAGTYLGADLLNNPGLGADLLNNPGLVAQDDLTSWKTALWFWNVNNYCHTAITSGQGFGATIQAINEAIECNGGNTHQVNDSISYYKN YCSQFGSD |
Full Sequence |
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Protein Sequence Length: 228 Download |
MSCWGELSGA VGDIATQDFF NGILSAASDG CAGKTFYTYI DFINAANSFS SFGTTGTSDD 60 NKEKLLLSSP TLLTRQGVYL CYVEEIAKSE YCDSSNTQYP CASGQQYYGR GPLQLTGNAN 120 YGAAGTYLGA DLLNNPGLGA DLLNNPGLVA QDDLTSWKTA LWFWNVNNYC HTAITSGQGF 180 GATIQAINEA IECNGGNTHQ VNDSISYYKN YCSQFGSDRM QRWKHPPS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00442 | lysozyme_like | 0.0002 | 100 | 164 | 65 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
COG3179 | COG3179 | 5.0e-5 | 104 | 164 | 61 | + Predicted chitinase [General function prediction only] | ||
pfam00182 | Glyco_hydro_19 | 3.0e-51 | 14 | 218 | 235 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 4.0e-56 | 16 | 216 | 231 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK21702.1 | 0 | 9 | 218 | 26 | 224 | unknown [Picea sitchensis] |
GenBank | ABK22545.1 | 0 | 9 | 218 | 26 | 224 | unknown [Picea sitchensis] |
GenBank | ABK23908.1 | 0 | 9 | 218 | 26 | 224 | unknown [Picea sitchensis] |
GenBank | ABR17294.1 | 0 | 1 | 218 | 18 | 224 | unknown [Picea sitchensis] |
GenBank | ACN39919.1 | 0 | 9 | 218 | 26 | 224 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hbh_A | 0 | 10 | 218 | 1 | 197 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3hbe_X | 0 | 10 | 218 | 1 | 197 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3hbd_A | 0 | 10 | 218 | 1 | 197 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3w3e_B | 3e-40 | 11 | 216 | 3 | 226 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
PDB | 3w3e_A | 3e-40 | 11 | 216 | 3 | 226 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR499296 | 210 | 9 | 218 | 0 |
DR498905 | 210 | 9 | 218 | 0 |
DR520657 | 210 | 9 | 218 | 0 |
DR530829 | 210 | 9 | 218 | 0 |
DR473845 | 210 | 9 | 218 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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