| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_17570g0010 |
| Family | GH28 |
| Protein Properties | Length: 455 Molecular Weight: 49153.4 Isoelectric Point: 7.6695 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 84 | 410 | 0 |
| TGACTSTLPSVFLVPRGRKYLVHPIEFKGPCRAPGLTVVISGTVVAPRDPWNPQDQESWLQFSYLQGITIEGGGIVDGSGQKWWAYSCRHYESQAMTLNF CTNVALRDLTFQNSPGEHLKLFASSDVEVRNLQITAPENSPNTDGIKVAVSQHVVIRNSKIGTGDDCVAILTGSSDIQINNIVCGPGHGISIGSLGKDNA RDTVSNVVVRGAYLTGTTNGLRIKTWQGGSGYAQNISFQNVKMNNVSNPIIIDQYYCGSSSGCRNQTSAVHVSSVSYTGISGTTATPEAIRLVCSSTVPC TNIVMEDVNIRMNEGIASTSFVANVKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 455 Download |
| MVSVVAENLR LLVLICIVSL LLGIASSQNT EPRQKSSLDS DSRRVRKLLD QNYLHRASVF 60 NVDMYGASGN GWSDDSKAFW AAWTGACTST LPSVFLVPRG RKYLVHPIEF KGPCRAPGLT 120 VVISGTVVAP RDPWNPQDQE SWLQFSYLQG ITIEGGGIVD GSGQKWWAYS CRHYESQAMT 180 LNFCTNVALR DLTFQNSPGE HLKLFASSDV EVRNLQITAP ENSPNTDGIK VAVSQHVVIR 240 NSKIGTGDDC VAILTGSSDI QINNIVCGPG HGISIGSLGK DNARDTVSNV VVRGAYLTGT 300 TNGLRIKTWQ GGSGYAQNIS FQNVKMNNVS NPIIIDQYYC GSSSGCRNQT SAVHVSSVSY 360 TGISGTTATP EAIRLVCSST VPCTNIVMED VNIRMNEGIA STSFVANVKG DGQRYRLRDA 420 TLLGAWEKHV PHAMGGPGEC PPHVVKGEGR SEEFH 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03003 | PLN03003 | 1.0e-94 | 57 | 393 | 341 | + Probable polygalacturonase At3g15720 | ||
| PLN03010 | PLN03010 | 7.0e-96 | 60 | 411 | 355 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 6.0e-99 | 87 | 409 | 328 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 2.0e-104 | 50 | 412 | 372 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 2.0e-130 | 59 | 404 | 355 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK23977.1 | 0 | 1 | 410 | 1 | 423 | unknown [Picea sitchensis] |
| GenBank | ABK26513.1 | 0 | 1 | 410 | 1 | 412 | unknown [Picea sitchensis] |
| GenBank | ABR18059.1 | 0 | 52 | 410 | 80 | 446 | unknown [Picea sitchensis] |
| GenBank | ACN40008.1 | 0 | 1 | 410 | 1 | 423 | unknown [Picea sitchensis] |
| RefSeq | XP_002328587.1 | 0 | 59 | 402 | 63 | 413 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rmg_A | 2e-20 | 61 | 419 | 22 | 362 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 1bhe_A | 8e-20 | 153 | 339 | 113 | 314 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1hg8_A | 9e-19 | 81 | 369 | 12 | 307 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
| PDB | 1nhc_F | 2e-18 | 151 | 366 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 2e-18 | 151 | 366 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
