Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_177881g0010 |
Family | GH19 |
Protein Properties | Length: 252 Molecular Weight: 27501.1 Isoelectric Point: 5.4945 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 5 | 131 | 1.54143e-44 |
TFECIFLHRNDTACPYHSFYTYKSFVEAAISYRDFGNTRDLSTLKREIASFLAQISHETTGGCATAPDSPYGWGLCFKEEINPHSTYCDNTFKKWPCVAG KSYHGRGPIQLSCNYNYGLAGKAIGFD |
Full Sequence |
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Protein Sequence Length: 252 Download |
SSDLTFECIF LHRNDTACPY HSFYTYKSFV EAAISYRDFG NTRDLSTLKR EIASFLAQIS 60 HETTGGCATA PDSPYGWGLC FKEEINPHST YCDNTFKKWP CVAGKSYHGR GPIQLSCNYN 120 YGLAGKAIGF DGSIVHSSAD LQANTFPSFG LVTNIINGGL ECGRGNNTNV SDQIGFYLRY 180 CQLLNADLGQ NIDCDPFLEL PGVAHSLLLL PGAPPVLVDC CPSPSGCCLT MFWASQWLFL 240 LPGSCPLFPN PS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00442 | lysozyme_like | 0.0008 | 53 | 131 | 79 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
cd00325 | chitinase_glyco_hydro_19 | 3.0e-79 | 6 | 194 | 227 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
pfam00182 | Glyco_hydro_19 | 3.0e-81 | 6 | 194 | 227 | + Chitinase class I. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC95376.1 | 0 | 2 | 194 | 44 | 274 | chitinase [Cynodon dactylon] |
GenBank | AAF00131.1 | 0 | 6 | 195 | 45 | 272 | AF147091_1 class II chitinase [Fragaria x ananassa] |
GenBank | ABU55294.1 | 0 | 6 | 195 | 45 | 272 | class II chitinase [Fragaria x ananassa] |
EMBL | CAA57773.1 | 0 | 2 | 194 | 41 | 271 | chitinase (class II) [Arachis hypogaea] |
RefSeq | XP_002515175.1 | 0 | 6 | 195 | 42 | 269 | class I chitinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dyg_B | 0 | 2 | 194 | 8 | 237 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 4dyg_A | 0 | 2 | 194 | 8 | 237 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 4dwx_B | 0 | 2 | 194 | 8 | 237 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 4dwx_A | 0 | 2 | 194 | 8 | 237 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 3cql_B | 0 | 2 | 194 | 7 | 236 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM713746 | 232 | 2 | 195 | 0 |
CN129927 | 225 | 9 | 194 | 0 |
EV532612 | 228 | 6 | 195 | 0 |
EW737071 | 225 | 9 | 195 | 0 |
DT518138 | 228 | 6 | 195 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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